Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00346Q8IVM7 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.84□□□□□ -0.03
LINC00346Q8IVM7 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.84□□□□□ -0.03
LINC00346Q8IVM7 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LINC00346Q8IVM7 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
LINC00346Q8IVM7 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
LINC00346Q8IVM7 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.83□□□□□ -0.03
LINC00346Q8IVM7 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
LINC00346Q8IVM7 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LINC00346Q8IVM7 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.83□□□□□ -0.03
LINC00346Q8IVM7 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LINC00346Q8IVM7 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LINC00346Q8IVM7 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.83□□□□□ -0.03
LINC00346Q8IVM7 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
LINC00346Q8IVM7 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00346Q8IVM7 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00346Q8IVM7 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00346Q8IVM7 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00346Q8IVM7 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
LINC00346Q8IVM7 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00346Q8IVM7 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.83□□□□□ -0.04
LINC00346Q8IVM7 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00346Q8IVM7 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
LINC00346Q8IVM7 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC14.83□□□□□ -0.04
LINC00346Q8IVM7 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.83□□□□□ -0.04
LINC00346Q8IVM7 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.83□□□□□ -0.04
LINC00346Q8IVM7 AC013467.2-201ENST00000605472 835 ntBASIC14.83□□□□□ -0.04
LINC00346Q8IVM7 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00346Q8IVM7 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
LINC00346Q8IVM7 AC107918.4-202ENST00000641623 219 ntBASIC14.83□□□□□ -0.04
LINC00346Q8IVM7 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
LINC00346Q8IVM7 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00346Q8IVM7 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
LINC00346Q8IVM7 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00346Q8IVM7 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.83□□□□□ -0.04
LINC00346Q8IVM7 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00346Q8IVM7 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
LINC00346Q8IVM7 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00346Q8IVM7 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00346Q8IVM7 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00346Q8IVM7 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00346Q8IVM7 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00346Q8IVM7 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00346Q8IVM7 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00346Q8IVM7 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00346Q8IVM7 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
LINC00346Q8IVM7 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
LINC00346Q8IVM7 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00346Q8IVM7 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
LINC00346Q8IVM7 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
LINC00346Q8IVM7 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00346Q8IVM7 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00346Q8IVM7 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00346Q8IVM7 AL671710.1-201ENST00000610245 2349 ntBASIC14.82□□□□□ -0.04
LINC00346Q8IVM7 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.82□□□□□ -0.04
LINC00346Q8IVM7 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00346Q8IVM7 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00346Q8IVM7 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
LINC00346Q8IVM7 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00346Q8IVM7 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.82□□□□□ -0.04
LINC00346Q8IVM7 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00346Q8IVM7 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00346Q8IVM7 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.82□□□□□ -0.04
LINC00346Q8IVM7 HLA-J-202ENST00000469281 1241 ntBASIC14.82□□□□□ -0.04
LINC00346Q8IVM7 SLC25A6P2-201ENST00000497974 877 ntBASIC14.82□□□□□ -0.04
LINC00346Q8IVM7 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00346Q8IVM7 AC073648.2-201ENST00000510116 352 ntBASIC14.82□□□□□ -0.04
LINC00346Q8IVM7 OR7E14P-202ENST00000530490 1290 ntBASIC14.82□□□□□ -0.04
LINC00346Q8IVM7 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.82□□□□□ -0.04
LINC00346Q8IVM7 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.82□□□□□ -0.04
LINC00346Q8IVM7 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.82□□□□□ -0.04
LINC00346Q8IVM7 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00346Q8IVM7 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.82□□□□□ -0.04
LINC00346Q8IVM7 TP73-AS1-207ENST00000624167 988 ntBASIC14.82□□□□□ -0.04
LINC00346Q8IVM7 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.82□□□□□ -0.04
LINC00346Q8IVM7 AL805961.1-202ENST00000641562 540 ntBASIC14.82□□□□□ -0.04
LINC00346Q8IVM7 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00346Q8IVM7 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00346Q8IVM7 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00346Q8IVM7 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.82□□□□□ -0.04
LINC00346Q8IVM7 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.82□□□□□ -0.04
LINC00346Q8IVM7 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00346Q8IVM7 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00346Q8IVM7 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00346Q8IVM7 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00346Q8IVM7 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00346Q8IVM7 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.82□□□□□ -0.04
LINC00346Q8IVM7 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.82□□□□□ -0.04
LINC00346Q8IVM7 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00346Q8IVM7 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.82□□□□□ -0.04
LINC00346Q8IVM7 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
LINC00346Q8IVM7 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.82□□□□□ -0.04
LINC00346Q8IVM7 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00346Q8IVM7 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00346Q8IVM7 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00346Q8IVM7 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LINC00346Q8IVM7 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00346Q8IVM7 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00346Q8IVM7 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00346Q8IVM7 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms