Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
CCDC71Q8IV32 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC71Q8IV32 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC71Q8IV32 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC71Q8IV32 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC71Q8IV32 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC71Q8IV32 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC71Q8IV32 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC71Q8IV32 AC097374.2-201ENST00000618617 1306 ntBASIC15.71■□□□□ 0.11
CCDC71Q8IV32 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC71Q8IV32 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC71Q8IV32 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC71Q8IV32 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC71Q8IV32 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC71Q8IV32 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC71Q8IV32 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CCDC71Q8IV32 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC71Q8IV32 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC71Q8IV32 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CCDC71Q8IV32 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CCDC71Q8IV32 COX5BP2-201ENST00000392354 334 ntBASIC15.71■□□□□ 0.11
CCDC71Q8IV32 LAGE3P1-201ENST00000425356 484 ntBASIC15.71■□□□□ 0.11
CCDC71Q8IV32 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC71Q8IV32 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.71■□□□□ 0.11
CCDC71Q8IV32 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC71Q8IV32 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC71Q8IV32 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC71Q8IV32 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.71■□□□□ 0.11
CCDC71Q8IV32 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC71Q8IV32 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC71Q8IV32 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.71■□□□□ 0.11
CCDC71Q8IV32 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.71■□□□□ 0.11
CCDC71Q8IV32 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC71Q8IV32 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.71■□□□□ 0.11
CCDC71Q8IV32 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC71Q8IV32 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC71Q8IV32 AL645728.1-201ENST00000366221 2101 ntBASIC15.71■□□□□ 0.11
CCDC71Q8IV32 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
CCDC71Q8IV32 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC71Q8IV32 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC71Q8IV32 AC079776.2-201ENST00000641154 1609 ntBASIC15.71■□□□□ 0.11
CCDC71Q8IV32 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CCDC71Q8IV32 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
CCDC71Q8IV32 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CCDC71Q8IV32 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CCDC71Q8IV32 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CCDC71Q8IV32 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CCDC71Q8IV32 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CCDC71Q8IV32 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC71Q8IV32 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC71Q8IV32 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC71Q8IV32 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC71Q8IV32 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC71Q8IV32 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC71Q8IV32 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CCDC71Q8IV32 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC71Q8IV32 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC71Q8IV32 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC71Q8IV32 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC71Q8IV32 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC71Q8IV32 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC71Q8IV32 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CCDC71Q8IV32 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC71Q8IV32 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
CCDC71Q8IV32 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC71Q8IV32 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CCDC71Q8IV32 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC71Q8IV32 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC71Q8IV32 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC71Q8IV32 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC71Q8IV32 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC71Q8IV32 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC71Q8IV32 UPF3AP3-201ENST00000420996 769 ntBASIC15.7■□□□□ 0.1
CCDC71Q8IV32 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC71Q8IV32 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC71Q8IV32 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.7■□□□□ 0.1
CCDC71Q8IV32 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.7■□□□□ 0.1
CCDC71Q8IV32 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC71Q8IV32 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.7■□□□□ 0.1
CCDC71Q8IV32 AL022326.1-202ENST00000641533 845 ntBASIC15.7■□□□□ 0.1
CCDC71Q8IV32 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CCDC71Q8IV32 AL513477.1-201ENST00000602865 2407 ntBASIC15.7■□□□□ 0.1
CCDC71Q8IV32 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
CCDC71Q8IV32 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CCDC71Q8IV32 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CCDC71Q8IV32 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC71Q8IV32 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC71Q8IV32 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC71Q8IV32 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC71Q8IV32 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.7■□□□□ 0.1
CCDC71Q8IV32 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC71Q8IV32 FER1L4-210ENST00000615531 5998 ntBASIC15.69■□□□□ 0.1
CCDC71Q8IV32 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC71Q8IV32 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CCDC71Q8IV32 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC71Q8IV32 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC71Q8IV32 FRMD8P1-201ENST00000440433 1524 ntBASIC15.69■□□□□ 0.1
CCDC71Q8IV32 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CCDC71Q8IV32 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC71Q8IV32 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms