Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SWSAP1Q6NVH7 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SWSAP1Q6NVH7 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.55■□□□□ 0.56
SWSAP1Q6NVH7 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SWSAP1Q6NVH7 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SWSAP1Q6NVH7 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SWSAP1Q6NVH7 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.55■□□□□ 0.56
SWSAP1Q6NVH7 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
SWSAP1Q6NVH7 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SWSAP1Q6NVH7 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SWSAP1Q6NVH7 RPL30-202ENST00000396070 440 ntTSL 2 BASIC18.55■□□□□ 0.56
SWSAP1Q6NVH7 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC18.55■□□□□ 0.56
SWSAP1Q6NVH7 SLBP-205ENST00000488267 987 ntTSL 2 BASIC18.55■□□□□ 0.56
SWSAP1Q6NVH7 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SWSAP1Q6NVH7 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SWSAP1Q6NVH7 NKG7-205ENST00000600427 520 ntTSL 3 BASIC18.55■□□□□ 0.56
SWSAP1Q6NVH7 Z92544.3-201ENST00000624747 417 ntBASIC18.55■□□□□ 0.56
SWSAP1Q6NVH7 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.55■□□□□ 0.56
SWSAP1Q6NVH7 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC18.55■□□□□ 0.56
SWSAP1Q6NVH7 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.55■□□□□ 0.56
SWSAP1Q6NVH7 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SWSAP1Q6NVH7 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.55■□□□□ 0.56
SWSAP1Q6NVH7 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SWSAP1Q6NVH7 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
SWSAP1Q6NVH7 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SWSAP1Q6NVH7 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SWSAP1Q6NVH7 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SWSAP1Q6NVH7 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SWSAP1Q6NVH7 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
SWSAP1Q6NVH7 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.54■□□□□ 0.56
SWSAP1Q6NVH7 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SWSAP1Q6NVH7 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.54■□□□□ 0.56
SWSAP1Q6NVH7 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
SWSAP1Q6NVH7 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SWSAP1Q6NVH7 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SWSAP1Q6NVH7 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SWSAP1Q6NVH7 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.54■□□□□ 0.56
SWSAP1Q6NVH7 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC18.54■□□□□ 0.56
SWSAP1Q6NVH7 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SWSAP1Q6NVH7 AC026150.2-201ENST00000564693 1156 ntBASIC18.54■□□□□ 0.56
SWSAP1Q6NVH7 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.54■□□□□ 0.56
SWSAP1Q6NVH7 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.54■□□□□ 0.56
SWSAP1Q6NVH7 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
SWSAP1Q6NVH7 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
SWSAP1Q6NVH7 RAB34-224ENST00000636513 888 ntTSL 5 BASIC18.54■□□□□ 0.56
SWSAP1Q6NVH7 RNF216P1-203ENST00000404404 2427 ntBASIC18.54■□□□□ 0.56
SWSAP1Q6NVH7 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SWSAP1Q6NVH7 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SWSAP1Q6NVH7 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SWSAP1Q6NVH7 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.54■□□□□ 0.56
SWSAP1Q6NVH7 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SWSAP1Q6NVH7 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SWSAP1Q6NVH7 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SWSAP1Q6NVH7 AC080080.1-201ENST00000625121 2420 ntBASIC18.53■□□□□ 0.56
SWSAP1Q6NVH7 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.53■□□□□ 0.56
SWSAP1Q6NVH7 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SWSAP1Q6NVH7 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SWSAP1Q6NVH7 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SWSAP1Q6NVH7 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.53■□□□□ 0.56
SWSAP1Q6NVH7 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
SWSAP1Q6NVH7 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SWSAP1Q6NVH7 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SWSAP1Q6NVH7 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.53■□□□□ 0.56
SWSAP1Q6NVH7 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC18.53■□□□□ 0.56
SWSAP1Q6NVH7 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SWSAP1Q6NVH7 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.53■□□□□ 0.56
SWSAP1Q6NVH7 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC18.53■□□□□ 0.56
SWSAP1Q6NVH7 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.53■□□□□ 0.56
SWSAP1Q6NVH7 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SWSAP1Q6NVH7 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.53■□□□□ 0.56
SWSAP1Q6NVH7 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.53■□□□□ 0.56
SWSAP1Q6NVH7 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.53■□□□□ 0.56
SWSAP1Q6NVH7 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.53■□□□□ 0.56
SWSAP1Q6NVH7 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC18.53■□□□□ 0.56
SWSAP1Q6NVH7 AL512356.2-201ENST00000546955 174 ntBASIC18.53■□□□□ 0.56
SWSAP1Q6NVH7 VPS29-207ENST00000549970 818 ntTSL 3 BASIC18.53■□□□□ 0.56
SWSAP1Q6NVH7 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.53■□□□□ 0.56
SWSAP1Q6NVH7 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SWSAP1Q6NVH7 AC093512.1-201ENST00000617969 520 ntBASIC18.53■□□□□ 0.56
SWSAP1Q6NVH7 AP001059.3-201ENST00000619053 235 ntBASIC18.53■□□□□ 0.56
SWSAP1Q6NVH7 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC18.53■□□□□ 0.56
SWSAP1Q6NVH7 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC18.53■□□□□ 0.56
SWSAP1Q6NVH7 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SWSAP1Q6NVH7 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SWSAP1Q6NVH7 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SWSAP1Q6NVH7 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
SWSAP1Q6NVH7 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.53■□□□□ 0.56
SWSAP1Q6NVH7 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SWSAP1Q6NVH7 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.53■□□□□ 0.56
SWSAP1Q6NVH7 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SWSAP1Q6NVH7 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SWSAP1Q6NVH7 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SWSAP1Q6NVH7 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
SWSAP1Q6NVH7 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.52■□□□□ 0.56
SWSAP1Q6NVH7 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.52■□□□□ 0.56
SWSAP1Q6NVH7 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SWSAP1Q6NVH7 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.52■□□□□ 0.56
SWSAP1Q6NVH7 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SWSAP1Q6NVH7 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SWSAP1Q6NVH7 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms