Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
VARS2Q5ST30 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.65■□□□□ 0.42
VARS2Q5ST30 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VARS2Q5ST30 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
VARS2Q5ST30 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VARS2Q5ST30 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VARS2Q5ST30 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
VARS2Q5ST30 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VARS2Q5ST30 AL391256.1-201ENST00000443260 1855 ntBASIC17.65■□□□□ 0.42
VARS2Q5ST30 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VARS2Q5ST30 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
VARS2Q5ST30 FO538757.1-201ENST00000623083 1397 ntBASIC17.65■□□□□ 0.42
VARS2Q5ST30 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
VARS2Q5ST30 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
VARS2Q5ST30 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
VARS2Q5ST30 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.64■□□□□ 0.42
VARS2Q5ST30 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
VARS2Q5ST30 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VARS2Q5ST30 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
VARS2Q5ST30 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VARS2Q5ST30 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VARS2Q5ST30 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
VARS2Q5ST30 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VARS2Q5ST30 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.64■□□□□ 0.41
VARS2Q5ST30 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.64■□□□□ 0.41
VARS2Q5ST30 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.64■□□□□ 0.41
VARS2Q5ST30 AC015922.1-201ENST00000421102 1152 ntBASIC17.64■□□□□ 0.41
VARS2Q5ST30 TREML5P-201ENST00000421694 576 ntBASIC17.64■□□□□ 0.41
VARS2Q5ST30 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.64■□□□□ 0.41
VARS2Q5ST30 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.64■□□□□ 0.41
VARS2Q5ST30 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VARS2Q5ST30 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
VARS2Q5ST30 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.64■□□□□ 0.41
VARS2Q5ST30 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.64■□□□□ 0.41
VARS2Q5ST30 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC17.64■□□□□ 0.41
VARS2Q5ST30 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.64■□□□□ 0.41
VARS2Q5ST30 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VARS2Q5ST30 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.64■□□□□ 0.41
VARS2Q5ST30 MIR4453-201ENST00000584019 89 ntBASIC17.64■□□□□ 0.41
VARS2Q5ST30 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.64■□□□□ 0.41
VARS2Q5ST30 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC17.64■□□□□ 0.41
VARS2Q5ST30 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.64■□□□□ 0.41
VARS2Q5ST30 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.64■□□□□ 0.41
VARS2Q5ST30 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.64■□□□□ 0.41
VARS2Q5ST30 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VARS2Q5ST30 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
VARS2Q5ST30 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
VARS2Q5ST30 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VARS2Q5ST30 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
VARS2Q5ST30 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VARS2Q5ST30 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.64■□□□□ 0.41
VARS2Q5ST30 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VARS2Q5ST30 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.64■□□□□ 0.41
VARS2Q5ST30 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
VARS2Q5ST30 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VARS2Q5ST30 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
VARS2Q5ST30 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.63■□□□□ 0.41
VARS2Q5ST30 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.63■□□□□ 0.41
VARS2Q5ST30 FOXO1B-201ENST00000504678 1527 ntBASIC17.63■□□□□ 0.41
VARS2Q5ST30 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VARS2Q5ST30 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VARS2Q5ST30 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VARS2Q5ST30 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
VARS2Q5ST30 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.63■□□□□ 0.41
VARS2Q5ST30 AP3S2-216ENST00000617003 1561 ntBASIC17.63■□□□□ 0.41
VARS2Q5ST30 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
VARS2Q5ST30 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.63■□□□□ 0.41
VARS2Q5ST30 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.63■□□□□ 0.41
VARS2Q5ST30 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
VARS2Q5ST30 BASP1P1-201ENST00000430708 665 ntBASIC17.63■□□□□ 0.41
VARS2Q5ST30 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.63■□□□□ 0.41
VARS2Q5ST30 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.63■□□□□ 0.41
VARS2Q5ST30 RARRES2P9-201ENST00000565168 469 ntBASIC17.63■□□□□ 0.41
VARS2Q5ST30 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.63■□□□□ 0.41
VARS2Q5ST30 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.63■□□□□ 0.41
VARS2Q5ST30 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.63■□□□□ 0.41
VARS2Q5ST30 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC17.63■□□□□ 0.41
VARS2Q5ST30 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VARS2Q5ST30 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.63■□□□□ 0.41
VARS2Q5ST30 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.63■□□□□ 0.41
VARS2Q5ST30 AL645728.1-201ENST00000366221 2101 ntBASIC17.63■□□□□ 0.41
VARS2Q5ST30 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
VARS2Q5ST30 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
VARS2Q5ST30 OR6D1P-202ENST00000641007 5290 ntBASIC17.63■□□□□ 0.41
VARS2Q5ST30 AC073439.1-201ENST00000624121 1774 ntBASIC17.63■□□□□ 0.41
VARS2Q5ST30 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VARS2Q5ST30 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
VARS2Q5ST30 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.63■□□□□ 0.41
VARS2Q5ST30 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
VARS2Q5ST30 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.63■□□□□ 0.41
VARS2Q5ST30 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VARS2Q5ST30 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VARS2Q5ST30 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.62■□□□□ 0.41
VARS2Q5ST30 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
VARS2Q5ST30 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
VARS2Q5ST30 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
VARS2Q5ST30 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
VARS2Q5ST30 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VARS2Q5ST30 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
VARS2Q5ST30 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms