Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AL096865.1-201ENST00000606796 927 ntBASIC20.09■□□□□ 0.81
RFX7Q2KHR2 AC020765.3-201ENST00000613051 740 ntBASIC20.09■□□□□ 0.81
RFX7Q2KHR2 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFX7Q2KHR2 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
RFX7Q2KHR2 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFX7Q2KHR2 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RFX7Q2KHR2 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFX7Q2KHR2 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC20.09■□□□□ 0.81
RFX7Q2KHR2 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC20.09■□□□□ 0.81
RFX7Q2KHR2 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC20.09■□□□□ 0.81
RFX7Q2KHR2 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFX7Q2KHR2 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFX7Q2KHR2 BCL2-203ENST00000589955 5011 ntBASIC20.09■□□□□ 0.81
RFX7Q2KHR2 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
RFX7Q2KHR2 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
RFX7Q2KHR2 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
RFX7Q2KHR2 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFX7Q2KHR2 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
RFX7Q2KHR2 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFX7Q2KHR2 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RFX7Q2KHR2 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC20.08■□□□□ 0.81
RFX7Q2KHR2 FAM86GP-201ENST00000448322 971 ntBASIC20.08■□□□□ 0.81
RFX7Q2KHR2 VPS29-207ENST00000549970 818 ntTSL 3 BASIC20.08■□□□□ 0.81
RFX7Q2KHR2 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RFX7Q2KHR2 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC20.08■□□□□ 0.81
RFX7Q2KHR2 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC20.08■□□□□ 0.81
RFX7Q2KHR2 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RFX7Q2KHR2 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RFX7Q2KHR2 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC20.08■□□□□ 0.81
RFX7Q2KHR2 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC20.08■□□□□ 0.81
RFX7Q2KHR2 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
RFX7Q2KHR2 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
RFX7Q2KHR2 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RFX7Q2KHR2 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC20.08■□□□□ 0.81
RFX7Q2KHR2 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC20.08■□□□□ 0.81
RFX7Q2KHR2 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RFX7Q2KHR2 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC20.08■□□□□ 0.81
RFX7Q2KHR2 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.8
RFX7Q2KHR2 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC20.08■□□□□ 0.8
RFX7Q2KHR2 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
RFX7Q2KHR2 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
RFX7Q2KHR2 ME2P1-201ENST00000426028 1970 ntBASIC20.08■□□□□ 0.8
RFX7Q2KHR2 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RFX7Q2KHR2 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RFX7Q2KHR2 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
RFX7Q2KHR2 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RFX7Q2KHR2 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RFX7Q2KHR2 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RFX7Q2KHR2 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RFX7Q2KHR2 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
RFX7Q2KHR2 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RFX7Q2KHR2 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.8
RFX7Q2KHR2 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RFX7Q2KHR2 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC20.08■□□□□ 0.8
RFX7Q2KHR2 AC005237.2-201ENST00000434368 219 ntBASIC20.08■□□□□ 0.8
RFX7Q2KHR2 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.8
RFX7Q2KHR2 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RFX7Q2KHR2 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC20.08■□□□□ 0.8
RFX7Q2KHR2 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
RFX7Q2KHR2 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
RFX7Q2KHR2 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC20.07■□□□□ 0.8
RFX7Q2KHR2 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFX7Q2KHR2 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
RFX7Q2KHR2 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
RFX7Q2KHR2 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFX7Q2KHR2 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFX7Q2KHR2 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFX7Q2KHR2 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFX7Q2KHR2 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFX7Q2KHR2 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
RFX7Q2KHR2 AC092171.3-201ENST00000610122 2651 ntBASIC20.07■□□□□ 0.8
RFX7Q2KHR2 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFX7Q2KHR2 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RFX7Q2KHR2 WASH6P-202ENST00000359512 1437 ntBASIC20.07■□□□□ 0.8
RFX7Q2KHR2 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFX7Q2KHR2 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
RFX7Q2KHR2 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC20.07■□□□□ 0.8
RFX7Q2KHR2 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFX7Q2KHR2 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
RFX7Q2KHR2 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC20.07■□□□□ 0.8
RFX7Q2KHR2 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC20.07■□□□□ 0.8
RFX7Q2KHR2 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC20.07■□□□□ 0.8
RFX7Q2KHR2 DPM2-202ENST00000373110 738 ntTSL 2 BASIC20.07■□□□□ 0.8
RFX7Q2KHR2 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RFX7Q2KHR2 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC20.07■□□□□ 0.8
RFX7Q2KHR2 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC20.07■□□□□ 0.8
RFX7Q2KHR2 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC20.07■□□□□ 0.8
RFX7Q2KHR2 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC20.07■□□□□ 0.8
RFX7Q2KHR2 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC20.07■□□□□ 0.8
RFX7Q2KHR2 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFX7Q2KHR2 RAB34-224ENST00000636513 888 ntTSL 5 BASIC20.07■□□□□ 0.8
RFX7Q2KHR2 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RFX7Q2KHR2 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFX7Q2KHR2 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RFX7Q2KHR2 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
RFX7Q2KHR2 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC20.06■□□□□ 0.8
RFX7Q2KHR2 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC20.06■□□□□ 0.8
RFX7Q2KHR2 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFX7Q2KHR2 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFX7Q2KHR2 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms