Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNRPFP62306 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNRPFP62306 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNRPFP62306 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
SNRPFP62306 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNRPFP62306 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SNRPFP62306 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.11■□□□□ 0.49
SNRPFP62306 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SNRPFP62306 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNRPFP62306 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNRPFP62306 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SNRPFP62306 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SNRPFP62306 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.11■□□□□ 0.49
SNRPFP62306 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
SNRPFP62306 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNRPFP62306 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNRPFP62306 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNRPFP62306 WASH6P-202ENST00000359512 1437 ntBASIC18.11■□□□□ 0.49
SNRPFP62306 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC18.11■□□□□ 0.49
SNRPFP62306 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SNRPFP62306 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNRPFP62306 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNRPFP62306 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
SNRPFP62306 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNRPFP62306 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNRPFP62306 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNRPFP62306 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNRPFP62306 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC18.1■□□□□ 0.49
SNRPFP62306 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.1■□□□□ 0.49
SNRPFP62306 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNRPFP62306 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SNRPFP62306 AC092919.2-201ENST00000623631 1645 ntBASIC18.1■□□□□ 0.49
SNRPFP62306 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.1■□□□□ 0.49
SNRPFP62306 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC18.1■□□□□ 0.49
SNRPFP62306 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SNRPFP62306 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.1■□□□□ 0.49
SNRPFP62306 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNRPFP62306 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.1■□□□□ 0.49
SNRPFP62306 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNRPFP62306 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNRPFP62306 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SNRPFP62306 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.1■□□□□ 0.49
SNRPFP62306 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.1■□□□□ 0.49
SNRPFP62306 MIR940-201ENST00000401276 94 ntBASIC18.1■□□□□ 0.49
SNRPFP62306 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SNRPFP62306 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SNRPFP62306 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
SNRPFP62306 POLD2P1-201ENST00000511220 997 ntBASIC18.1■□□□□ 0.49
SNRPFP62306 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.1■□□□□ 0.49
SNRPFP62306 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
SNRPFP62306 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.1■□□□□ 0.49
SNRPFP62306 MTDHP5-201ENST00000598980 586 ntBASIC18.1■□□□□ 0.49
SNRPFP62306 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.1■□□□□ 0.49
SNRPFP62306 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC18.1■□□□□ 0.49
SNRPFP62306 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNRPFP62306 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SNRPFP62306 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNRPFP62306 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC18.09■□□□□ 0.49
SNRPFP62306 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNRPFP62306 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNRPFP62306 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SNRPFP62306 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SNRPFP62306 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SNRPFP62306 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNRPFP62306 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.09■□□□□ 0.49
SNRPFP62306 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNRPFP62306 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNRPFP62306 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.09■□□□□ 0.49
SNRPFP62306 AKAP8P1-201ENST00000434743 1349 ntBASIC18.09■□□□□ 0.49
SNRPFP62306 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
SNRPFP62306 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.09■□□□□ 0.49
SNRPFP62306 AC023274.1-201ENST00000418278 595 ntBASIC18.09■□□□□ 0.49
SNRPFP62306 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.09■□□□□ 0.49
SNRPFP62306 ACTG1P14-201ENST00000446382 1122 ntBASIC18.09■□□□□ 0.49
SNRPFP62306 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.09■□□□□ 0.49
SNRPFP62306 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNRPFP62306 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SNRPFP62306 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.09■□□□□ 0.49
SNRPFP62306 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.09■□□□□ 0.49
SNRPFP62306 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SNRPFP62306 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18.09■□□□□ 0.49
SNRPFP62306 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.09■□□□□ 0.49
SNRPFP62306 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNRPFP62306 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
SNRPFP62306 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SNRPFP62306 ALOX12P2-203ENST00000570921 1945 ntBASIC18.09■□□□□ 0.49
SNRPFP62306 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNRPFP62306 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNRPFP62306 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC18.09■□□□□ 0.49
SNRPFP62306 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
SNRPFP62306 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.09■□□□□ 0.49
SNRPFP62306 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SNRPFP62306 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.08■□□□□ 0.49
SNRPFP62306 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
SNRPFP62306 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
SNRPFP62306 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SNRPFP62306 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
SNRPFP62306 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SNRPFP62306 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
SNRPFP62306 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms