Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ATXN3P54252 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.14■□□□□ 0.33
ATXN3P54252 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATXN3P54252 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
ATXN3P54252 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATXN3P54252 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.14■□□□□ 0.33
ATXN3P54252 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
ATXN3P54252 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ATXN3P54252 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATXN3P54252 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATXN3P54252 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ATXN3P54252 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
ATXN3P54252 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ATXN3P54252 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.14■□□□□ 0.33
ATXN3P54252 DDX43P3-201ENST00000441064 443 ntBASIC17.14■□□□□ 0.33
ATXN3P54252 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ATXN3P54252 FAM86GP-201ENST00000448322 971 ntBASIC17.14■□□□□ 0.33
ATXN3P54252 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.14■□□□□ 0.33
ATXN3P54252 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
ATXN3P54252 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
ATXN3P54252 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATXN3P54252 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
ATXN3P54252 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATXN3P54252 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.14■□□□□ 0.33
ATXN3P54252 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
ATXN3P54252 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.14■□□□□ 0.33
ATXN3P54252 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATXN3P54252 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.13■□□□□ 0.33
ATXN3P54252 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ATXN3P54252 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATXN3P54252 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.13■□□□□ 0.33
ATXN3P54252 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.13■□□□□ 0.33
ATXN3P54252 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATXN3P54252 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ATXN3P54252 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.13■□□□□ 0.33
ATXN3P54252 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
ATXN3P54252 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATXN3P54252 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATXN3P54252 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATXN3P54252 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
ATXN3P54252 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATXN3P54252 RHOQP3-201ENST00000437982 621 ntBASIC17.13■□□□□ 0.33
ATXN3P54252 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
ATXN3P54252 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.13■□□□□ 0.33
ATXN3P54252 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.13■□□□□ 0.33
ATXN3P54252 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.13■□□□□ 0.33
ATXN3P54252 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
ATXN3P54252 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.13■□□□□ 0.33
ATXN3P54252 AC109462.3-201ENST00000573934 613 ntBASIC17.13■□□□□ 0.33
ATXN3P54252 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.13■□□□□ 0.33
ATXN3P54252 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ATXN3P54252 AC116407.2-201ENST00000613639 860 ntBASIC17.13■□□□□ 0.33
ATXN3P54252 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATXN3P54252 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ATXN3P54252 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATXN3P54252 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATXN3P54252 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATXN3P54252 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.13■□□□□ 0.33
ATXN3P54252 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATXN3P54252 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ATXN3P54252 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATXN3P54252 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.13■□□□□ 0.33
ATXN3P54252 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATXN3P54252 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATXN3P54252 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.13■□□□□ 0.33
ATXN3P54252 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATXN3P54252 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATXN3P54252 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATXN3P54252 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATXN3P54252 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATXN3P54252 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.12■□□□□ 0.33
ATXN3P54252 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
ATXN3P54252 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATXN3P54252 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATXN3P54252 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATXN3P54252 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
ATXN3P54252 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATXN3P54252 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATXN3P54252 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATXN3P54252 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATXN3P54252 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.12■□□□□ 0.33
ATXN3P54252 AL139400.1-201ENST00000366220 510 ntBASIC17.12■□□□□ 0.33
ATXN3P54252 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATXN3P54252 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.12■□□□□ 0.33
ATXN3P54252 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATXN3P54252 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATXN3P54252 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATXN3P54252 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATXN3P54252 PAWRP1-201ENST00000451083 565 ntBASIC17.12■□□□□ 0.33
ATXN3P54252 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATXN3P54252 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.12■□□□□ 0.33
ATXN3P54252 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.12■□□□□ 0.33
ATXN3P54252 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.12■□□□□ 0.33
ATXN3P54252 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATXN3P54252 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATXN3P54252 PI4KAP1-204ENST00000612579 1703 ntBASIC17.12■□□□□ 0.33
ATXN3P54252 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.12■□□□□ 0.33
ATXN3P54252 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.12■□□□□ 0.33
ATXN3P54252 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATXN3P54252 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms