Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.2■□□□□ 0.34
ITGA8P53708 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ITGA8P53708 PCED1CP-201ENST00000419887 785 ntBASIC17.2■□□□□ 0.34
ITGA8P53708 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.2■□□□□ 0.34
ITGA8P53708 AC104819.1-201ENST00000504587 486 ntBASIC17.2■□□□□ 0.34
ITGA8P53708 AP000867.3-201ENST00000524675 377 ntBASIC17.2■□□□□ 0.34
ITGA8P53708 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.2■□□□□ 0.34
ITGA8P53708 MIR5100-201ENST00000579544 119 ntBASIC17.2■□□□□ 0.34
ITGA8P53708 MIR3180-1-201ENST00000580374 94 ntBASIC17.2■□□□□ 0.34
ITGA8P53708 MIR3180-3-201ENST00000584616 94 ntBASIC17.2■□□□□ 0.34
ITGA8P53708 AC091076.1-201ENST00000610741 619 ntBASIC17.2■□□□□ 0.34
ITGA8P53708 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
ITGA8P53708 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ITGA8P53708 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ITGA8P53708 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ITGA8P53708 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ITGA8P53708 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
ITGA8P53708 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ITGA8P53708 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ITGA8P53708 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ITGA8P53708 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ITGA8P53708 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ITGA8P53708 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ITGA8P53708 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
ITGA8P53708 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ITGA8P53708 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
ITGA8P53708 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.19■□□□□ 0.34
ITGA8P53708 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
ITGA8P53708 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ITGA8P53708 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.19■□□□□ 0.34
ITGA8P53708 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ITGA8P53708 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.19■□□□□ 0.34
ITGA8P53708 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.19■□□□□ 0.34
ITGA8P53708 GGT4P-201ENST00000623672 1708 ntBASIC17.19■□□□□ 0.34
ITGA8P53708 TOP3BP1-201ENST00000420768 1380 ntBASIC17.19■□□□□ 0.34
ITGA8P53708 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ITGA8P53708 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.19■□□□□ 0.34
ITGA8P53708 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ITGA8P53708 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ITGA8P53708 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.19■□□□□ 0.34
ITGA8P53708 BX005266.1-201ENST00000473402 457 ntBASIC17.19■□□□□ 0.34
ITGA8P53708 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ITGA8P53708 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.19■□□□□ 0.34
ITGA8P53708 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.19■□□□□ 0.34
ITGA8P53708 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.19■□□□□ 0.34
ITGA8P53708 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ITGA8P53708 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.19■□□□□ 0.34
ITGA8P53708 AC064862.7-201ENST00000604520 867 ntBASIC17.19■□□□□ 0.34
ITGA8P53708 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.19■□□□□ 0.34
ITGA8P53708 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.19■□□□□ 0.34
ITGA8P53708 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.19■□□□□ 0.34
ITGA8P53708 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.19■□□□□ 0.34
ITGA8P53708 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.19■□□□□ 0.34
ITGA8P53708 AC010491.1-201ENST00000563101 2797 ntBASIC17.19■□□□□ 0.34
ITGA8P53708 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ITGA8P53708 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.19■□□□□ 0.34
ITGA8P53708 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ITGA8P53708 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ITGA8P53708 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
ITGA8P53708 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
ITGA8P53708 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ITGA8P53708 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ITGA8P53708 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.18■□□□□ 0.34
ITGA8P53708 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.18■□□□□ 0.34
ITGA8P53708 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ITGA8P53708 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
ITGA8P53708 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ITGA8P53708 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ITGA8P53708 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.18■□□□□ 0.34
ITGA8P53708 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ITGA8P53708 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.18■□□□□ 0.34
ITGA8P53708 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ITGA8P53708 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ITGA8P53708 AL031731.1-201ENST00000642131 2094 ntBASIC17.18■□□□□ 0.34
ITGA8P53708 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
ITGA8P53708 NUS1P2-201ENST00000417358 873 ntBASIC17.18■□□□□ 0.34
ITGA8P53708 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ITGA8P53708 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.18■□□□□ 0.34
ITGA8P53708 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.18■□□□□ 0.34
ITGA8P53708 AC099336.1-202ENST00000602961 463 ntBASIC17.18■□□□□ 0.34
ITGA8P53708 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.18■□□□□ 0.34
ITGA8P53708 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.18■□□□□ 0.34
ITGA8P53708 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.18■□□□□ 0.34
ITGA8P53708 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
ITGA8P53708 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
ITGA8P53708 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.18■□□□□ 0.34
ITGA8P53708 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.18■□□□□ 0.34
ITGA8P53708 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ITGA8P53708 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.18■□□□□ 0.34
ITGA8P53708 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.18■□□□□ 0.34
ITGA8P53708 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
ITGA8P53708 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
ITGA8P53708 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ITGA8P53708 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ITGA8P53708 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ITGA8P53708 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ITGA8P53708 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ITGA8P53708 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ITGA8P53708 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ITGA8P53708 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms