Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.64■□□□□ 0.25
NUBP1P53384 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.64■□□□□ 0.25
NUBP1P53384 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.64■□□□□ 0.25
NUBP1P53384 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NUBP1P53384 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC16.63■□□□□ 0.25
NUBP1P53384 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NUBP1P53384 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
NUBP1P53384 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.63■□□□□ 0.25
NUBP1P53384 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.63■□□□□ 0.25
NUBP1P53384 AL020996.1-203ENST00000536896 2307 ntBASIC16.63■□□□□ 0.25
NUBP1P53384 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.63■□□□□ 0.25
NUBP1P53384 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NUBP1P53384 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NUBP1P53384 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NUBP1P53384 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NUBP1P53384 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NUBP1P53384 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NUBP1P53384 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
NUBP1P53384 ATP6V1B1-AS1-201ENST00000422761 1129 ntTSL 2 BASIC16.63■□□□□ 0.25
NUBP1P53384 MTATP6P11-201ENST00000428071 670 ntBASIC16.63■□□□□ 0.25
NUBP1P53384 MTCO2P3-201ENST00000442543 421 ntBASIC16.63■□□□□ 0.25
NUBP1P53384 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NUBP1P53384 AC106868.1-201ENST00000505272 992 ntBASIC16.63■□□□□ 0.25
NUBP1P53384 MTND1P36-201ENST00000522384 936 ntBASIC16.63■□□□□ 0.25
NUBP1P53384 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
NUBP1P53384 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.63■□□□□ 0.25
NUBP1P53384 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC16.63■□□□□ 0.25
NUBP1P53384 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC16.63■□□□□ 0.25
NUBP1P53384 AP003117.1-201ENST00000602771 554 ntBASIC16.63■□□□□ 0.25
NUBP1P53384 AC091614.1-201ENST00000606898 879 ntTSL 3 BASIC16.63■□□□□ 0.25
NUBP1P53384 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NUBP1P53384 AL669831.3-208ENST00000634337 891 ntTSL 5 BASIC16.63■□□□□ 0.25
NUBP1P53384 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.63■□□□□ 0.25
NUBP1P53384 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
NUBP1P53384 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NUBP1P53384 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NUBP1P53384 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NUBP1P53384 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.63■□□□□ 0.25
NUBP1P53384 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NUBP1P53384 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NUBP1P53384 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NUBP1P53384 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.63■□□□□ 0.25
NUBP1P53384 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NUBP1P53384 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NUBP1P53384 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
NUBP1P53384 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NUBP1P53384 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NUBP1P53384 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.63■□□□□ 0.25
NUBP1P53384 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NUBP1P53384 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NUBP1P53384 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.62■□□□□ 0.25
NUBP1P53384 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC16.62■□□□□ 0.25
NUBP1P53384 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC16.62■□□□□ 0.25
NUBP1P53384 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.62■□□□□ 0.25
NUBP1P53384 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NUBP1P53384 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.62■□□□□ 0.25
NUBP1P53384 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NUBP1P53384 USP9YP19-201ENST00000412165 485 ntBASIC16.62■□□□□ 0.25
NUBP1P53384 GPAA1P2-201ENST00000417923 928 ntBASIC16.62■□□□□ 0.25
NUBP1P53384 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.62■□□□□ 0.25
NUBP1P53384 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
NUBP1P53384 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
NUBP1P53384 CTBP2P5-201ENST00000454986 1264 ntBASIC16.62■□□□□ 0.25
NUBP1P53384 MTND6P32-201ENST00000457611 483 ntBASIC16.62■□□□□ 0.25
NUBP1P53384 AC099548.2-209ENST00000480264 625 ntBASIC16.62■□□□□ 0.25
NUBP1P53384 RNA5SP423-201ENST00000517127 109 ntBASIC16.62■□□□□ 0.25
NUBP1P53384 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NUBP1P53384 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC16.62■□□□□ 0.25
NUBP1P53384 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.62■□□□□ 0.25
NUBP1P53384 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.62■□□□□ 0.25
NUBP1P53384 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.62■□□□□ 0.25
NUBP1P53384 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC16.62■□□□□ 0.25
NUBP1P53384 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NUBP1P53384 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.62■□□□□ 0.25
NUBP1P53384 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC16.62■□□□□ 0.25
NUBP1P53384 AC087752.4-201ENST00000605911 462 ntBASIC16.62■□□□□ 0.25
NUBP1P53384 MIR8072-201ENST00000614241 80 ntBASIC16.62■□□□□ 0.25
NUBP1P53384 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC16.62■□□□□ 0.25
NUBP1P53384 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NUBP1P53384 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
NUBP1P53384 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.62■□□□□ 0.25
NUBP1P53384 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.62■□□□□ 0.25
NUBP1P53384 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
NUBP1P53384 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NUBP1P53384 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
NUBP1P53384 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.62■□□□□ 0.25
NUBP1P53384 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NUBP1P53384 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.62■□□□□ 0.25
NUBP1P53384 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
NUBP1P53384 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NUBP1P53384 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC16.61■□□□□ 0.25
NUBP1P53384 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC16.61■□□□□ 0.25
NUBP1P53384 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NUBP1P53384 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NUBP1P53384 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
NUBP1P53384 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.61■□□□□ 0.25
NUBP1P53384 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NUBP1P53384 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.61■□□□□ 0.25
NUBP1P53384 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.61■□□□□ 0.25
NUBP1P53384 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms