Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AP3S2-216ENST00000617003 1561 ntBASIC17.71■□□□□ 0.43
BRCC3P46736 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
BRCC3P46736 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
BRCC3P46736 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
BRCC3P46736 FO538757.1-201ENST00000623083 1397 ntBASIC17.71■□□□□ 0.43
BRCC3P46736 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BRCC3P46736 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BRCC3P46736 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BRCC3P46736 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
BRCC3P46736 AC055876.3-201ENST00000431496 288 ntBASIC17.71■□□□□ 0.43
BRCC3P46736 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.71■□□□□ 0.43
BRCC3P46736 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.71■□□□□ 0.43
BRCC3P46736 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.71■□□□□ 0.43
BRCC3P46736 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.71■□□□□ 0.43
BRCC3P46736 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.71■□□□□ 0.43
BRCC3P46736 MIR3197-201ENST00000582241 73 ntBASIC17.71■□□□□ 0.43
BRCC3P46736 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.71■□□□□ 0.43
BRCC3P46736 MIR4453-201ENST00000584019 89 ntBASIC17.71■□□□□ 0.43
BRCC3P46736 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.71■□□□□ 0.43
BRCC3P46736 AC138649.4-201ENST00000612222 287 ntBASIC17.71■□□□□ 0.43
BRCC3P46736 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
BRCC3P46736 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
BRCC3P46736 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.71■□□□□ 0.43
BRCC3P46736 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
BRCC3P46736 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
BRCC3P46736 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
BRCC3P46736 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.71■□□□□ 0.43
BRCC3P46736 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
BRCC3P46736 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
BRCC3P46736 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BRCC3P46736 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BRCC3P46736 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
BRCC3P46736 AC073439.1-201ENST00000624121 1774 ntBASIC17.71■□□□□ 0.43
BRCC3P46736 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
BRCC3P46736 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.71■□□□□ 0.42
BRCC3P46736 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
BRCC3P46736 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
BRCC3P46736 AC005915.1-201ENST00000624912 2018 ntBASIC17.71■□□□□ 0.42
BRCC3P46736 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.42
BRCC3P46736 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
BRCC3P46736 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
BRCC3P46736 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
BRCC3P46736 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BRCC3P46736 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BRCC3P46736 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.7■□□□□ 0.42
BRCC3P46736 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BRCC3P46736 AL512652.2-201ENST00000625156 1716 ntBASIC17.7■□□□□ 0.42
BRCC3P46736 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
BRCC3P46736 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BRCC3P46736 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
BRCC3P46736 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BRCC3P46736 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.7■□□□□ 0.42
BRCC3P46736 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
BRCC3P46736 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BRCC3P46736 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.7■□□□□ 0.42
BRCC3P46736 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
BRCC3P46736 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.7■□□□□ 0.42
BRCC3P46736 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.7■□□□□ 0.42
BRCC3P46736 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.7■□□□□ 0.42
BRCC3P46736 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.7■□□□□ 0.42
BRCC3P46736 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.7■□□□□ 0.42
BRCC3P46736 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.7■□□□□ 0.42
BRCC3P46736 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
BRCC3P46736 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
BRCC3P46736 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BRCC3P46736 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.7■□□□□ 0.42
BRCC3P46736 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.7■□□□□ 0.42
BRCC3P46736 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.7■□□□□ 0.42
BRCC3P46736 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BRCC3P46736 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BRCC3P46736 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BRCC3P46736 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BRCC3P46736 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
BRCC3P46736 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
BRCC3P46736 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
BRCC3P46736 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BRCC3P46736 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
BRCC3P46736 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
BRCC3P46736 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
BRCC3P46736 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
BRCC3P46736 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
BRCC3P46736 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BRCC3P46736 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.69■□□□□ 0.42
BRCC3P46736 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
BRCC3P46736 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BRCC3P46736 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BRCC3P46736 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
BRCC3P46736 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.69■□□□□ 0.42
BRCC3P46736 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.69■□□□□ 0.42
BRCC3P46736 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.69■□□□□ 0.42
BRCC3P46736 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.69■□□□□ 0.42
BRCC3P46736 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BRCC3P46736 RARRES2P9-201ENST00000565168 469 ntBASIC17.69■□□□□ 0.42
BRCC3P46736 AC140878.1-201ENST00000565277 250 ntBASIC17.69■□□□□ 0.42
BRCC3P46736 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.69■□□□□ 0.42
BRCC3P46736 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.69■□□□□ 0.42
BRCC3P46736 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BRCC3P46736 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
BRCC3P46736 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
BRCC3P46736 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms