Protein–RNA interactions for Protein: P17483

HOXB4, Homeobox protein Hox-B4, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB4P17483 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HOXB4P17483 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC13.98□□□□□ -0.17
HOXB4P17483 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
HOXB4P17483 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HOXB4P17483 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC13.97□□□□□ -0.17
HOXB4P17483 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HOXB4P17483 OR6D1P-202ENST00000641007 5290 ntBASIC13.97□□□□□ -0.17
HOXB4P17483 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC13.97□□□□□ -0.17
HOXB4P17483 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC13.97□□□□□ -0.17
HOXB4P17483 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC13.97□□□□□ -0.17
HOXB4P17483 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
HOXB4P17483 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
HOXB4P17483 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
HOXB4P17483 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HOXB4P17483 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC13.97□□□□□ -0.17
HOXB4P17483 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
HOXB4P17483 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HOXB4P17483 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HOXB4P17483 DGCR5-201ENST00000399539 862 ntBASIC13.97□□□□□ -0.17
HOXB4P17483 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HOXB4P17483 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.97□□□□□ -0.17
HOXB4P17483 AL353779.1-201ENST00000434793 351 ntBASIC13.97□□□□□ -0.17
HOXB4P17483 AC140658.5-201ENST00000438532 169 ntBASIC13.97□□□□□ -0.17
HOXB4P17483 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.97□□□□□ -0.17
HOXB4P17483 GATD1-206ENST00000526325 756 ntTSL 5 BASIC13.97□□□□□ -0.17
HOXB4P17483 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.97□□□□□ -0.17
HOXB4P17483 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
HOXB4P17483 LINC01225-203ENST00000563550 1244 ntBASIC13.97□□□□□ -0.17
HOXB4P17483 AKR1B10P2-201ENST00000577332 927 ntBASIC13.97□□□□□ -0.17
HOXB4P17483 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.97□□□□□ -0.17
HOXB4P17483 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC13.97□□□□□ -0.17
HOXB4P17483 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.97□□□□□ -0.17
HOXB4P17483 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.97□□□□□ -0.17
HOXB4P17483 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC13.97□□□□□ -0.17
HOXB4P17483 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HOXB4P17483 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HOXB4P17483 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
HOXB4P17483 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
HOXB4P17483 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
HOXB4P17483 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
HOXB4P17483 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HOXB4P17483 HNRNPRP1-201ENST00000453465 1695 ntBASIC13.97□□□□□ -0.17
HOXB4P17483 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC13.97□□□□□ -0.17
HOXB4P17483 CROCCP2-202ENST00000412962 2773 ntBASIC13.97□□□□□ -0.17
HOXB4P17483 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC13.97□□□□□ -0.17
HOXB4P17483 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
HOXB4P17483 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
HOXB4P17483 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC13.97□□□□□ -0.17
HOXB4P17483 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HOXB4P17483 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HOXB4P17483 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
HOXB4P17483 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC13.97□□□□□ -0.17
HOXB4P17483 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HOXB4P17483 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
HOXB4P17483 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC13.96□□□□□ -0.17
HOXB4P17483 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HOXB4P17483 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
HOXB4P17483 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HOXB4P17483 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HOXB4P17483 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HOXB4P17483 AKAP8P1-201ENST00000434743 1349 ntBASIC13.96□□□□□ -0.17
HOXB4P17483 AC129492.6-201ENST00000611383 1305 ntBASIC13.96□□□□□ -0.17
HOXB4P17483 UXT-AS1-201ENST00000590504 1525 ntBASIC13.96□□□□□ -0.17
HOXB4P17483 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HOXB4P17483 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HOXB4P17483 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
HOXB4P17483 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HOXB4P17483 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
HOXB4P17483 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HOXB4P17483 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HOXB4P17483 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
HOXB4P17483 AC116353.5-201ENST00000638148 1699 ntBASIC13.96□□□□□ -0.17
HOXB4P17483 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HOXB4P17483 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
HOXB4P17483 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
HOXB4P17483 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HOXB4P17483 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
HOXB4P17483 AP006294.1-201ENST00000415407 339 ntBASIC13.96□□□□□ -0.17
HOXB4P17483 AC087163.2-201ENST00000457299 853 ntBASIC13.96□□□□□ -0.17
HOXB4P17483 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC13.96□□□□□ -0.17
HOXB4P17483 IGHV3-62-201ENST00000520057 340 ntBASIC13.96□□□□□ -0.17
HOXB4P17483 USB1-203ENST00000539737 1212 ntTSL 2 BASIC13.96□□□□□ -0.17
HOXB4P17483 RARRES2P8-201ENST00000566335 367 ntBASIC13.96□□□□□ -0.17
HOXB4P17483 ARL16-210ENST00000574938 751 ntTSL 2 BASIC13.96□□□□□ -0.17
HOXB4P17483 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
HOXB4P17483 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.96□□□□□ -0.17
HOXB4P17483 AC099568.2-201ENST00000609194 695 ntBASIC13.96□□□□□ -0.17
HOXB4P17483 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.96□□□□□ -0.17
HOXB4P17483 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HOXB4P17483 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
HOXB4P17483 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HOXB4P17483 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC13.96□□□□□ -0.17
HOXB4P17483 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
HOXB4P17483 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
HOXB4P17483 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HOXB4P17483 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
HOXB4P17483 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HOXB4P17483 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
HOXB4P17483 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
HOXB4P17483 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms