Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC18.71■□□□□ 0.59
CYP3A4P08684 LTB4R2-202ENST00000528054 3092 ntBASIC18.71■□□□□ 0.59
CYP3A4P08684 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CYP3A4P08684 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC18.71■□□□□ 0.59
CYP3A4P08684 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.71■□□□□ 0.58
CYP3A4P08684 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CYP3A4P08684 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CYP3A4P08684 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
CYP3A4P08684 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CYP3A4P08684 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CYP3A4P08684 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CYP3A4P08684 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CYP3A4P08684 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CYP3A4P08684 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CYP3A4P08684 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CYP3A4P08684 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CYP3A4P08684 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CYP3A4P08684 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CYP3A4P08684 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC18.7■□□□□ 0.58
CYP3A4P08684 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CYP3A4P08684 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.7■□□□□ 0.58
CYP3A4P08684 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.7■□□□□ 0.58
CYP3A4P08684 DAD1-205ENST00000543337 501 ntTSL 3 BASIC18.7■□□□□ 0.58
CYP3A4P08684 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC18.7■□□□□ 0.58
CYP3A4P08684 AL512356.2-201ENST00000546955 174 ntBASIC18.7■□□□□ 0.58
CYP3A4P08684 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.7■□□□□ 0.58
CYP3A4P08684 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC18.7■□□□□ 0.58
CYP3A4P08684 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CYP3A4P08684 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CYP3A4P08684 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
CYP3A4P08684 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CYP3A4P08684 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CYP3A4P08684 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC18.69■□□□□ 0.58
CYP3A4P08684 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CYP3A4P08684 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CYP3A4P08684 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.69■□□□□ 0.58
CYP3A4P08684 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CYP3A4P08684 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CYP3A4P08684 UBALD1-205ENST00000590891 2641 ntBASIC18.69■□□□□ 0.58
CYP3A4P08684 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CYP3A4P08684 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CYP3A4P08684 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC18.69■□□□□ 0.58
CYP3A4P08684 METTL21AP1-201ENST00000438852 635 ntBASIC18.69■□□□□ 0.58
CYP3A4P08684 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.69■□□□□ 0.58
CYP3A4P08684 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC18.69■□□□□ 0.58
CYP3A4P08684 AC109322.1-201ENST00000524499 1264 ntBASIC18.69■□□□□ 0.58
CYP3A4P08684 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CYP3A4P08684 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.69■□□□□ 0.58
CYP3A4P08684 AP001059.3-201ENST00000619053 235 ntBASIC18.69■□□□□ 0.58
CYP3A4P08684 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CYP3A4P08684 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CYP3A4P08684 PRORSD1P-202ENST00000563365 2154 ntBASIC18.69■□□□□ 0.58
CYP3A4P08684 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC18.69■□□□□ 0.58
CYP3A4P08684 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CYP3A4P08684 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CYP3A4P08684 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CYP3A4P08684 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.69■□□□□ 0.58
CYP3A4P08684 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CYP3A4P08684 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CYP3A4P08684 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CYP3A4P08684 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC18.68■□□□□ 0.58
CYP3A4P08684 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CYP3A4P08684 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
CYP3A4P08684 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
CYP3A4P08684 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CYP3A4P08684 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CYP3A4P08684 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CYP3A4P08684 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CYP3A4P08684 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CYP3A4P08684 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
CYP3A4P08684 RPL30-202ENST00000396070 440 ntTSL 2 BASIC18.68■□□□□ 0.58
CYP3A4P08684 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC18.68■□□□□ 0.58
CYP3A4P08684 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18.68■□□□□ 0.58
CYP3A4P08684 PMS2P2-201ENST00000425039 1128 ntBASIC18.68■□□□□ 0.58
CYP3A4P08684 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CYP3A4P08684 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC18.68■□□□□ 0.58
CYP3A4P08684 LINC00628-201ENST00000628516 1289 ntBASIC18.68■□□□□ 0.58
CYP3A4P08684 RAB34-224ENST00000636513 888 ntTSL 5 BASIC18.68■□□□□ 0.58
CYP3A4P08684 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
CYP3A4P08684 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CYP3A4P08684 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CYP3A4P08684 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CYP3A4P08684 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.68■□□□□ 0.58
CYP3A4P08684 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CYP3A4P08684 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CYP3A4P08684 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.68■□□□□ 0.58
CYP3A4P08684 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CYP3A4P08684 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CYP3A4P08684 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CYP3A4P08684 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CYP3A4P08684 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.68■□□□□ 0.58
CYP3A4P08684 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.68■□□□□ 0.58
CYP3A4P08684 AC011676.5-201ENST00000624864 2660 ntBASIC18.67■□□□□ 0.58
CYP3A4P08684 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CYP3A4P08684 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CYP3A4P08684 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CYP3A4P08684 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CYP3A4P08684 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.67■□□□□ 0.58
CYP3A4P08684 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CYP3A4P08684 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms