Protein–RNA interactions for Protein: P08240

SRPRA, Signal recognition particle receptor subunit alpha, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRAP08240 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.82■□□□□ 0.28
SRPRAP08240 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SRPRAP08240 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.82■□□□□ 0.28
SRPRAP08240 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.82■□□□□ 0.28
SRPRAP08240 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SRPRAP08240 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SRPRAP08240 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.82■□□□□ 0.28
SRPRAP08240 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SRPRAP08240 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.82■□□□□ 0.28
SRPRAP08240 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SRPRAP08240 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.82■□□□□ 0.28
SRPRAP08240 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SRPRAP08240 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SRPRAP08240 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.82■□□□□ 0.28
SRPRAP08240 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.82■□□□□ 0.28
SRPRAP08240 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
SRPRAP08240 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SRPRAP08240 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SRPRAP08240 MIR770-201ENST00000390219 98 ntBASIC16.82■□□□□ 0.28
SRPRAP08240 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
SRPRAP08240 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.82■□□□□ 0.28
SRPRAP08240 AC142381.1-201ENST00000426099 345 ntBASIC16.82■□□□□ 0.28
SRPRAP08240 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SRPRAP08240 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.82■□□□□ 0.28
SRPRAP08240 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.82■□□□□ 0.28
SRPRAP08240 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.82■□□□□ 0.28
SRPRAP08240 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.82■□□□□ 0.28
SRPRAP08240 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SRPRAP08240 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.82■□□□□ 0.28
SRPRAP08240 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.82■□□□□ 0.28
SRPRAP08240 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SRPRAP08240 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SRPRAP08240 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SRPRAP08240 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SRPRAP08240 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SRPRAP08240 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SRPRAP08240 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SRPRAP08240 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SRPRAP08240 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SRPRAP08240 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
SRPRAP08240 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.82■□□□□ 0.28
SRPRAP08240 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SRPRAP08240 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SRPRAP08240 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
SRPRAP08240 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.81■□□□□ 0.28
SRPRAP08240 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SRPRAP08240 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SRPRAP08240 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SRPRAP08240 TUBB3P1-201ENST00000405796 1332 ntBASIC16.81■□□□□ 0.28
SRPRAP08240 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SRPRAP08240 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SRPRAP08240 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SRPRAP08240 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.81■□□□□ 0.28
SRPRAP08240 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.81■□□□□ 0.28
SRPRAP08240 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.81■□□□□ 0.28
SRPRAP08240 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.81■□□□□ 0.28
SRPRAP08240 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SRPRAP08240 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.81■□□□□ 0.28
SRPRAP08240 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.81■□□□□ 0.28
SRPRAP08240 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SRPRAP08240 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.81■□□□□ 0.28
SRPRAP08240 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.81■□□□□ 0.28
SRPRAP08240 AC051619.7-201ENST00000568314 623 ntBASIC16.81■□□□□ 0.28
SRPRAP08240 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SRPRAP08240 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
SRPRAP08240 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.81■□□□□ 0.28
SRPRAP08240 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SRPRAP08240 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SRPRAP08240 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.81■□□□□ 0.28
SRPRAP08240 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SRPRAP08240 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.81■□□□□ 0.28
SRPRAP08240 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SRPRAP08240 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SRPRAP08240 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SRPRAP08240 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SRPRAP08240 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.8■□□□□ 0.28
SRPRAP08240 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SRPRAP08240 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.8■□□□□ 0.28
SRPRAP08240 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SRPRAP08240 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SRPRAP08240 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SRPRAP08240 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SRPRAP08240 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SRPRAP08240 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SRPRAP08240 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SRPRAP08240 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SRPRAP08240 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.8■□□□□ 0.28
SRPRAP08240 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SRPRAP08240 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
SRPRAP08240 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SRPRAP08240 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.8■□□□□ 0.28
SRPRAP08240 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.8■□□□□ 0.28
SRPRAP08240 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.8■□□□□ 0.28
SRPRAP08240 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SRPRAP08240 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SRPRAP08240 AC020765.3-201ENST00000613051 740 ntBASIC16.8■□□□□ 0.28
SRPRAP08240 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.8■□□□□ 0.28
SRPRAP08240 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.8■□□□□ 0.28
SRPRAP08240 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
SRPRAP08240 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms