Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.25■□□□□ 0.19
KRT6AP02538 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
KRT6AP02538 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.25■□□□□ 0.19
KRT6AP02538 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
KRT6AP02538 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.25■□□□□ 0.19
KRT6AP02538 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
KRT6AP02538 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.25■□□□□ 0.19
KRT6AP02538 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
KRT6AP02538 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
KRT6AP02538 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.25■□□□□ 0.19
KRT6AP02538 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT6AP02538 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.24■□□□□ 0.19
KRT6AP02538 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
KRT6AP02538 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
KRT6AP02538 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
KRT6AP02538 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT6AP02538 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
KRT6AP02538 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.24■□□□□ 0.19
KRT6AP02538 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT6AP02538 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.24■□□□□ 0.19
KRT6AP02538 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.24■□□□□ 0.19
KRT6AP02538 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT6AP02538 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
KRT6AP02538 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
KRT6AP02538 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
KRT6AP02538 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT6AP02538 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.24■□□□□ 0.19
KRT6AP02538 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.24■□□□□ 0.19
KRT6AP02538 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.24■□□□□ 0.19
KRT6AP02538 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT6AP02538 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.24■□□□□ 0.19
KRT6AP02538 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.24■□□□□ 0.19
KRT6AP02538 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT6AP02538 AL805961.1-202ENST00000641562 540 ntBASIC16.24■□□□□ 0.19
KRT6AP02538 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT6AP02538 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
KRT6AP02538 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
KRT6AP02538 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
KRT6AP02538 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT6AP02538 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
KRT6AP02538 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT6AP02538 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT6AP02538 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT6AP02538 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.24■□□□□ 0.19
KRT6AP02538 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
KRT6AP02538 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT6AP02538 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT6AP02538 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT6AP02538 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
KRT6AP02538 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
KRT6AP02538 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
KRT6AP02538 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT6AP02538 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
KRT6AP02538 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
KRT6AP02538 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
KRT6AP02538 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
KRT6AP02538 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
KRT6AP02538 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
KRT6AP02538 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
KRT6AP02538 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT6AP02538 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT6AP02538 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.23■□□□□ 0.19
KRT6AP02538 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.23■□□□□ 0.19
KRT6AP02538 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.23■□□□□ 0.19
KRT6AP02538 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.23■□□□□ 0.19
KRT6AP02538 AC021087.4-201ENST00000563761 564 ntBASIC16.23■□□□□ 0.19
KRT6AP02538 AC091167.2-201ENST00000579581 588 ntBASIC16.23■□□□□ 0.19
KRT6AP02538 MPDU1-223ENST00000582151 728 ntBASIC16.23■□□□□ 0.19
KRT6AP02538 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.23■□□□□ 0.19
KRT6AP02538 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.23■□□□□ 0.19
KRT6AP02538 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT6AP02538 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT6AP02538 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.23■□□□□ 0.19
KRT6AP02538 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.23■□□□□ 0.19
KRT6AP02538 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.23■□□□□ 0.19
KRT6AP02538 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
KRT6AP02538 ALOX12P2-203ENST00000570921 1945 ntBASIC16.23■□□□□ 0.19
KRT6AP02538 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
KRT6AP02538 AC002310.6-201ENST00000624451 1377 ntBASIC16.23■□□□□ 0.19
KRT6AP02538 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT6AP02538 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT6AP02538 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT6AP02538 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT6AP02538 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT6AP02538 AL662844.4-201ENST00000606367 2838 ntBASIC16.23■□□□□ 0.19
KRT6AP02538 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
KRT6AP02538 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
KRT6AP02538 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
KRT6AP02538 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.22■□□□□ 0.19
KRT6AP02538 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT6AP02538 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT6AP02538 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT6AP02538 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT6AP02538 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
KRT6AP02538 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT6AP02538 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT6AP02538 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
KRT6AP02538 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT6AP02538 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT6AP02538 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms