Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
IFNA1P01562 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.28□□□□□ -0.28
IFNA1P01562 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
IFNA1P01562 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
IFNA1P01562 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
IFNA1P01562 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
IFNA1P01562 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
IFNA1P01562 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC13.28□□□□□ -0.28
IFNA1P01562 GAS7-202ENST00000396115 929 ntTSL 5 BASIC13.28□□□□□ -0.28
IFNA1P01562 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
IFNA1P01562 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC13.28□□□□□ -0.28
IFNA1P01562 AC069152.1-201ENST00000438030 544 ntBASIC13.28□□□□□ -0.28
IFNA1P01562 SEC1P-202ENST00000473944 940 ntBASIC13.28□□□□□ -0.28
IFNA1P01562 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC13.28□□□□□ -0.28
IFNA1P01562 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC13.28□□□□□ -0.28
IFNA1P01562 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC13.28□□□□□ -0.28
IFNA1P01562 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC13.28□□□□□ -0.28
IFNA1P01562 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
IFNA1P01562 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
IFNA1P01562 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
IFNA1P01562 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
IFNA1P01562 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
IFNA1P01562 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
IFNA1P01562 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
IFNA1P01562 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.28□□□□□ -0.28
IFNA1P01562 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
IFNA1P01562 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
IFNA1P01562 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.28□□□□□ -0.28
IFNA1P01562 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
IFNA1P01562 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC13.28□□□□□ -0.28
IFNA1P01562 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
IFNA1P01562 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
IFNA1P01562 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
IFNA1P01562 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
IFNA1P01562 SP100-205ENST00000409824 1802 ntTSL 5 BASIC13.27□□□□□ -0.28
IFNA1P01562 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
IFNA1P01562 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
IFNA1P01562 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
IFNA1P01562 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
IFNA1P01562 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
IFNA1P01562 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
IFNA1P01562 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC13.27□□□□□ -0.28
IFNA1P01562 AC023157.3-201ENST00000619086 2088 ntBASIC13.27□□□□□ -0.28
IFNA1P01562 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
IFNA1P01562 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
IFNA1P01562 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
IFNA1P01562 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
IFNA1P01562 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
IFNA1P01562 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
IFNA1P01562 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
IFNA1P01562 CRYGFP-201ENST00000418459 633 ntBASIC13.27□□□□□ -0.29
IFNA1P01562 TSPY12P-201ENST00000421279 868 ntBASIC13.27□□□□□ -0.29
IFNA1P01562 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC13.27□□□□□ -0.29
IFNA1P01562 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
IFNA1P01562 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC13.27□□□□□ -0.29
IFNA1P01562 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC13.27□□□□□ -0.29
IFNA1P01562 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC13.27□□□□□ -0.29
IFNA1P01562 GRAMD4P8-201ENST00000605465 1115 ntBASIC13.27□□□□□ -0.29
IFNA1P01562 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
IFNA1P01562 KRT89P-201ENST00000620027 1478 ntBASIC13.27□□□□□ -0.29
IFNA1P01562 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
IFNA1P01562 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
IFNA1P01562 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
IFNA1P01562 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC13.27□□□□□ -0.29
IFNA1P01562 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
IFNA1P01562 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
IFNA1P01562 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
IFNA1P01562 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
IFNA1P01562 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
IFNA1P01562 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
IFNA1P01562 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
IFNA1P01562 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
IFNA1P01562 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
IFNA1P01562 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
IFNA1P01562 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC13.27□□□□□ -0.29
IFNA1P01562 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
IFNA1P01562 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
IFNA1P01562 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
IFNA1P01562 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
IFNA1P01562 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.27□□□□□ -0.29
IFNA1P01562 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
IFNA1P01562 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
IFNA1P01562 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
IFNA1P01562 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
IFNA1P01562 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
IFNA1P01562 AC010491.1-201ENST00000563101 2797 ntBASIC13.26□□□□□ -0.29
IFNA1P01562 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC13.26□□□□□ -0.29
IFNA1P01562 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
IFNA1P01562 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
IFNA1P01562 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
IFNA1P01562 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
IFNA1P01562 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
IFNA1P01562 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
IFNA1P01562 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC13.26□□□□□ -0.29
IFNA1P01562 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
IFNA1P01562 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
IFNA1P01562 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC13.26□□□□□ -0.29
IFNA1P01562 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
IFNA1P01562 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
IFNA1P01562 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms