Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PPP1R3DO95685 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PPP1R3DO95685 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.15■□□□□ 0.02
PPP1R3DO95685 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PPP1R3DO95685 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.15■□□□□ 0.02
PPP1R3DO95685 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
PPP1R3DO95685 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PPP1R3DO95685 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PPP1R3DO95685 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
PPP1R3DO95685 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.15■□□□□ 0.02
PPP1R3DO95685 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.15■□□□□ 0.02
PPP1R3DO95685 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.15■□□□□ 0.02
PPP1R3DO95685 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC15.15■□□□□ 0.02
PPP1R3DO95685 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.15■□□□□ 0.02
PPP1R3DO95685 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.15■□□□□ 0.02
PPP1R3DO95685 AL139011.1-202ENST00000642063 584 ntBASIC15.15■□□□□ 0.02
PPP1R3DO95685 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PPP1R3DO95685 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.15■□□□□ 0.02
PPP1R3DO95685 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.15■□□□□ 0.02
PPP1R3DO95685 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.15■□□□□ 0.02
PPP1R3DO95685 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PPP1R3DO95685 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PPP1R3DO95685 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PPP1R3DO95685 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PPP1R3DO95685 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PPP1R3DO95685 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PPP1R3DO95685 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PPP1R3DO95685 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PPP1R3DO95685 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.15■□□□□ 0.02
PPP1R3DO95685 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PPP1R3DO95685 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PPP1R3DO95685 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PPP1R3DO95685 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
PPP1R3DO95685 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PPP1R3DO95685 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PPP1R3DO95685 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PPP1R3DO95685 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PPP1R3DO95685 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PPP1R3DO95685 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.14■□□□□ 0.01
PPP1R3DO95685 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
PPP1R3DO95685 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PPP1R3DO95685 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.14■□□□□ 0.01
PPP1R3DO95685 TOP3BP1-201ENST00000420768 1380 ntBASIC15.14■□□□□ 0.01
PPP1R3DO95685 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PPP1R3DO95685 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.14■□□□□ 0.01
PPP1R3DO95685 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.14■□□□□ 0.01
PPP1R3DO95685 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PPP1R3DO95685 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PPP1R3DO95685 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PPP1R3DO95685 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PPP1R3DO95685 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PPP1R3DO95685 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PPP1R3DO95685 RBM17P3-201ENST00000417687 1192 ntBASIC15.14■□□□□ 0.01
PPP1R3DO95685 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.14■□□□□ 0.01
PPP1R3DO95685 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC15.14■□□□□ 0.01
PPP1R3DO95685 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.14■□□□□ 0.01
PPP1R3DO95685 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC15.14■□□□□ 0.01
PPP1R3DO95685 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.14■□□□□ 0.01
PPP1R3DO95685 MTDHP3-201ENST00000594186 672 ntBASIC15.14■□□□□ 0.01
PPP1R3DO95685 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PPP1R3DO95685 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.14■□□□□ 0.01
PPP1R3DO95685 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PPP1R3DO95685 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.14■□□□□ 0.01
PPP1R3DO95685 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PPP1R3DO95685 AC132872.4-202ENST00000622924 2756 ntBASIC15.14■□□□□ 0.01
PPP1R3DO95685 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.14■□□□□ 0.01
PPP1R3DO95685 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PPP1R3DO95685 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PPP1R3DO95685 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.14■□□□□ 0.01
PPP1R3DO95685 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
PPP1R3DO95685 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PPP1R3DO95685 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PPP1R3DO95685 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PPP1R3DO95685 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.14■□□□□ 0.01
PPP1R3DO95685 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PPP1R3DO95685 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PPP1R3DO95685 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PPP1R3DO95685 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PPP1R3DO95685 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PPP1R3DO95685 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PPP1R3DO95685 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.14■□□□□ 0.01
PPP1R3DO95685 AL671710.1-201ENST00000610245 2349 ntBASIC15.14■□□□□ 0.01
PPP1R3DO95685 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PPP1R3DO95685 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
PPP1R3DO95685 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PPP1R3DO95685 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
PPP1R3DO95685 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PPP1R3DO95685 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.13■□□□□ 0.01
PPP1R3DO95685 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
PPP1R3DO95685 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PPP1R3DO95685 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
PPP1R3DO95685 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.13■□□□□ 0.01
PPP1R3DO95685 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PPP1R3DO95685 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PPP1R3DO95685 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PPP1R3DO95685 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.13■□□□□ 0.01
PPP1R3DO95685 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
PPP1R3DO95685 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC15.13■□□□□ 0.01
PPP1R3DO95685 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
PPP1R3DO95685 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms