Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC14.93□□□□□ -0.02
PFDN1O60925 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PFDN1O60925 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PFDN1O60925 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PFDN1O60925 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC14.93□□□□□ -0.02
PFDN1O60925 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PFDN1O60925 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PFDN1O60925 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC14.93□□□□□ -0.02
PFDN1O60925 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC14.93□□□□□ -0.02
PFDN1O60925 AC116407.2-201ENST00000613639 860 ntBASIC14.93□□□□□ -0.02
PFDN1O60925 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC14.93□□□□□ -0.02
PFDN1O60925 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
PFDN1O60925 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PFDN1O60925 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PFDN1O60925 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PFDN1O60925 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.93□□□□□ -0.02
PFDN1O60925 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.93□□□□□ -0.02
PFDN1O60925 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.93□□□□□ -0.02
PFDN1O60925 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PFDN1O60925 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
PFDN1O60925 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PFDN1O60925 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
PFDN1O60925 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PFDN1O60925 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PFDN1O60925 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PFDN1O60925 RCC2P3-201ENST00000418112 1537 ntBASIC14.92□□□□□ -0.02
PFDN1O60925 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC14.92□□□□□ -0.02
PFDN1O60925 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
PFDN1O60925 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PFDN1O60925 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PFDN1O60925 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PFDN1O60925 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PFDN1O60925 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PFDN1O60925 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.92□□□□□ -0.02
PFDN1O60925 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PFDN1O60925 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC14.92□□□□□ -0.02
PFDN1O60925 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PFDN1O60925 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PFDN1O60925 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PFDN1O60925 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC14.92□□□□□ -0.02
PFDN1O60925 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC14.92□□□□□ -0.02
PFDN1O60925 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PFDN1O60925 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC14.92□□□□□ -0.02
PFDN1O60925 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC14.92□□□□□ -0.02
PFDN1O60925 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PFDN1O60925 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PFDN1O60925 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PFDN1O60925 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
PFDN1O60925 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PFDN1O60925 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
PFDN1O60925 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PFDN1O60925 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.92□□□□□ -0.02
PFDN1O60925 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PFDN1O60925 LINC01230-201ENST00000625222 3017 ntBASIC14.92□□□□□ -0.02
PFDN1O60925 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
PFDN1O60925 TCAF1P1-201ENST00000414990 2232 ntBASIC14.92□□□□□ -0.02
PFDN1O60925 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PFDN1O60925 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PFDN1O60925 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PFDN1O60925 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PFDN1O60925 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC14.92□□□□□ -0.02
PFDN1O60925 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PFDN1O60925 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC14.92□□□□□ -0.02
PFDN1O60925 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PFDN1O60925 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PFDN1O60925 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PFDN1O60925 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.91□□□□□ -0.02
PFDN1O60925 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
PFDN1O60925 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PFDN1O60925 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
PFDN1O60925 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
PFDN1O60925 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PFDN1O60925 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PFDN1O60925 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PFDN1O60925 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PFDN1O60925 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PFDN1O60925 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PFDN1O60925 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC14.91□□□□□ -0.02
PFDN1O60925 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC14.91□□□□□ -0.02
PFDN1O60925 TERF1P5-201ENST00000477545 1207 ntBASIC14.91□□□□□ -0.02
PFDN1O60925 AC124947.2-201ENST00000547118 1133 ntBASIC14.91□□□□□ -0.02
PFDN1O60925 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
PFDN1O60925 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.91□□□□□ -0.02
PFDN1O60925 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
PFDN1O60925 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
PFDN1O60925 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PFDN1O60925 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC14.91□□□□□ -0.02
PFDN1O60925 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
PFDN1O60925 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC14.91□□□□□ -0.02
PFDN1O60925 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PFDN1O60925 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PFDN1O60925 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.91□□□□□ -0.02
PFDN1O60925 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PFDN1O60925 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC14.91□□□□□ -0.02
PFDN1O60925 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PFDN1O60925 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PFDN1O60925 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
PFDN1O60925 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
PFDN1O60925 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.91□□□□□ -0.02
PFDN1O60925 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms