Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.01□□□□□ -0.01
ZIC3O60481 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.01□□□□□ -0.01
ZIC3O60481 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.01□□□□□ -0.01
ZIC3O60481 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.01□□□□□ -0.01
ZIC3O60481 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.01□□□□□ -0.01
ZIC3O60481 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ZIC3O60481 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ZIC3O60481 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ZIC3O60481 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
ZIC3O60481 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
ZIC3O60481 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
ZIC3O60481 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.01□□□□□ -0.01
ZIC3O60481 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ZIC3O60481 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ZIC3O60481 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ZIC3O60481 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15□□□□□ -0.01
ZIC3O60481 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15□□□□□ -0.01
ZIC3O60481 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
ZIC3O60481 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
ZIC3O60481 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15□□□□□ -0.01
ZIC3O60481 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15□□□□□ -0.01
ZIC3O60481 PCDHA12-202ENST00000613593 2588 ntBASIC15□□□□□ -0.01
ZIC3O60481 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ZIC3O60481 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15□□□□□ -0.01
ZIC3O60481 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15□□□□□ -0.01
ZIC3O60481 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15□□□□□ -0.01
ZIC3O60481 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15□□□□□ -0.01
ZIC3O60481 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
ZIC3O60481 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ZIC3O60481 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ZIC3O60481 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15□□□□□ -0.01
ZIC3O60481 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15□□□□□ -0.01
ZIC3O60481 SPCS2P4-201ENST00000436160 681 ntBASIC15□□□□□ -0.01
ZIC3O60481 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15□□□□□ -0.01
ZIC3O60481 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15□□□□□ -0.01
ZIC3O60481 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15□□□□□ -0.01
ZIC3O60481 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
ZIC3O60481 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
ZIC3O60481 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15□□□□□ -0.01
ZIC3O60481 AL138918.1-201ENST00000568306 659 ntBASIC15□□□□□ -0.01
ZIC3O60481 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15□□□□□ -0.01
ZIC3O60481 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15□□□□□ -0.01
ZIC3O60481 AC004835.2-201ENST00000603762 682 ntBASIC15□□□□□ -0.01
ZIC3O60481 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
ZIC3O60481 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
ZIC3O60481 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
ZIC3O60481 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
ZIC3O60481 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ZIC3O60481 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15□□□□□ -0.01
ZIC3O60481 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15□□□□□ -0.01
ZIC3O60481 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
ZIC3O60481 GGT4P-201ENST00000623672 1708 ntBASIC15□□□□□ -0.01
ZIC3O60481 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15□□□□□ -0.01
ZIC3O60481 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC15□□□□□ -0.01
ZIC3O60481 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
ZIC3O60481 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
ZIC3O60481 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
ZIC3O60481 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ZIC3O60481 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
ZIC3O60481 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
ZIC3O60481 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.99□□□□□ -0.01
ZIC3O60481 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.99□□□□□ -0.01
ZIC3O60481 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14.99□□□□□ -0.01
ZIC3O60481 UBALD1-205ENST00000590891 2641 ntBASIC14.99□□□□□ -0.01
ZIC3O60481 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
ZIC3O60481 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ZIC3O60481 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
ZIC3O60481 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.99□□□□□ -0.01
ZIC3O60481 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
ZIC3O60481 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ZIC3O60481 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
ZIC3O60481 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
ZIC3O60481 GPAA1P2-202ENST00000606848 1787 ntBASIC14.99□□□□□ -0.01
ZIC3O60481 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ZIC3O60481 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ZIC3O60481 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ZIC3O60481 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ZIC3O60481 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ZIC3O60481 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.99□□□□□ -0.01
ZIC3O60481 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.99□□□□□ -0.01
ZIC3O60481 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
ZIC3O60481 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.99□□□□□ -0.01
ZIC3O60481 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ZIC3O60481 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.99□□□□□ -0.01
ZIC3O60481 AC092183.1-201ENST00000469884 875 ntBASIC14.99□□□□□ -0.01
ZIC3O60481 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.99□□□□□ -0.01
ZIC3O60481 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.99□□□□□ -0.01
ZIC3O60481 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.99□□□□□ -0.01
ZIC3O60481 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
ZIC3O60481 AC093520.2-201ENST00000561830 333 ntBASIC14.99□□□□□ -0.01
ZIC3O60481 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
ZIC3O60481 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ZIC3O60481 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ZIC3O60481 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.99□□□□□ -0.01
ZIC3O60481 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ZIC3O60481 NF2-208ENST00000403435 2568 ntTSL 5 BASIC14.99□□□□□ -0.01
ZIC3O60481 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ZIC3O60481 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.99□□□□□ -0.01
ZIC3O60481 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.99□□□□□ -0.01
ZIC3O60481 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms