Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC28A2O43868 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC28A2O43868 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC28A2O43868 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC28A2O43868 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
SLC28A2O43868 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
SLC28A2O43868 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC28A2O43868 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.16■□□□□ 0.18
SLC28A2O43868 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC28A2O43868 INGX-202ENST00000489074 768 ntBASIC16.16■□□□□ 0.18
SLC28A2O43868 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.16■□□□□ 0.18
SLC28A2O43868 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.16■□□□□ 0.18
SLC28A2O43868 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.16■□□□□ 0.18
SLC28A2O43868 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SLC28A2O43868 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC28A2O43868 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
SLC28A2O43868 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC28A2O43868 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC28A2O43868 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC28A2O43868 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC28A2O43868 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC28A2O43868 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC28A2O43868 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC28A2O43868 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC28A2O43868 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SLC28A2O43868 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC28A2O43868 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC28A2O43868 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC28A2O43868 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC28A2O43868 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC28A2O43868 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.15■□□□□ 0.18
SLC28A2O43868 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.15■□□□□ 0.18
SLC28A2O43868 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.15■□□□□ 0.18
SLC28A2O43868 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
SLC28A2O43868 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC28A2O43868 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC28A2O43868 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC28A2O43868 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.15■□□□□ 0.18
SLC28A2O43868 ACTG1P14-201ENST00000446382 1122 ntBASIC16.15■□□□□ 0.18
SLC28A2O43868 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC28A2O43868 TERF1P3-201ENST00000505638 1227 ntBASIC16.15■□□□□ 0.18
SLC28A2O43868 STK19B-204ENST00000512515 211 ntBASIC16.15■□□□□ 0.18
SLC28A2O43868 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.15■□□□□ 0.18
SLC28A2O43868 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.15■□□□□ 0.18
SLC28A2O43868 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC28A2O43868 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.15■□□□□ 0.18
SLC28A2O43868 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SLC28A2O43868 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC28A2O43868 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC28A2O43868 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC28A2O43868 AC105020.1-201ENST00000435356 2205 ntBASIC16.15■□□□□ 0.18
SLC28A2O43868 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC28A2O43868 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC28A2O43868 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SLC28A2O43868 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.15■□□□□ 0.18
SLC28A2O43868 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC28A2O43868 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC28A2O43868 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
SLC28A2O43868 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC28A2O43868 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
SLC28A2O43868 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
SLC28A2O43868 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC28A2O43868 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.14■□□□□ 0.17
SLC28A2O43868 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.14■□□□□ 0.17
SLC28A2O43868 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SLC28A2O43868 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC28A2O43868 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC28A2O43868 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC28A2O43868 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.14■□□□□ 0.17
SLC28A2O43868 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SLC28A2O43868 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC28A2O43868 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC28A2O43868 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC28A2O43868 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SLC28A2O43868 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC28A2O43868 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SLC28A2O43868 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC28A2O43868 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
SLC28A2O43868 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC28A2O43868 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC28A2O43868 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.14■□□□□ 0.17
SLC28A2O43868 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC28A2O43868 FAM58CP-201ENST00000435741 640 ntBASIC16.14■□□□□ 0.17
SLC28A2O43868 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.14■□□□□ 0.17
SLC28A2O43868 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC28A2O43868 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SLC28A2O43868 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.14■□□□□ 0.17
SLC28A2O43868 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.14■□□□□ 0.17
SLC28A2O43868 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
SLC28A2O43868 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SLC28A2O43868 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SLC28A2O43868 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.14■□□□□ 0.17
SLC28A2O43868 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.14■□□□□ 0.17
SLC28A2O43868 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
SLC28A2O43868 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.14■□□□□ 0.17
SLC28A2O43868 AC079776.2-201ENST00000641154 1609 ntBASIC16.14■□□□□ 0.17
SLC28A2O43868 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC28A2O43868 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SLC28A2O43868 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC28A2O43868 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms