Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.34■□□□□ 0.37
MSI1O43347 AC092171.3-201ENST00000610122 2651 ntBASIC17.34■□□□□ 0.37
MSI1O43347 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MSI1O43347 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.34■□□□□ 0.37
MSI1O43347 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
MSI1O43347 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.34■□□□□ 0.37
MSI1O43347 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MSI1O43347 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MSI1O43347 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
MSI1O43347 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MSI1O43347 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MSI1O43347 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.33■□□□□ 0.37
MSI1O43347 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
MSI1O43347 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
MSI1O43347 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
MSI1O43347 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
MSI1O43347 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
MSI1O43347 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
MSI1O43347 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
MSI1O43347 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
MSI1O43347 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
MSI1O43347 AL512652.2-201ENST00000625156 1716 ntBASIC17.33■□□□□ 0.37
MSI1O43347 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
MSI1O43347 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.33■□□□□ 0.37
MSI1O43347 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
MSI1O43347 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
MSI1O43347 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MSI1O43347 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
MSI1O43347 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.33■□□□□ 0.36
MSI1O43347 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MSI1O43347 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
MSI1O43347 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.33■□□□□ 0.36
MSI1O43347 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.33■□□□□ 0.36
MSI1O43347 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
MSI1O43347 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
MSI1O43347 AC022145.2-201ENST00000598203 171 ntBASIC17.33■□□□□ 0.36
MSI1O43347 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.33■□□□□ 0.36
MSI1O43347 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.33■□□□□ 0.36
MSI1O43347 AL161645.1-201ENST00000622716 1255 ntBASIC17.33■□□□□ 0.36
MSI1O43347 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.33■□□□□ 0.36
MSI1O43347 AC105339.1-204ENST00000636249 355 ntBASIC17.33■□□□□ 0.36
MSI1O43347 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.33■□□□□ 0.36
MSI1O43347 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MSI1O43347 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
MSI1O43347 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.33■□□□□ 0.36
MSI1O43347 AC124067.4-201ENST00000519691 2379 ntBASIC17.33■□□□□ 0.36
MSI1O43347 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
MSI1O43347 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MSI1O43347 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
MSI1O43347 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
MSI1O43347 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
MSI1O43347 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
MSI1O43347 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
MSI1O43347 FLJ38576-201ENST00000623820 2459 ntBASIC17.32■□□□□ 0.36
MSI1O43347 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MSI1O43347 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MSI1O43347 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MSI1O43347 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
MSI1O43347 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
MSI1O43347 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
MSI1O43347 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
MSI1O43347 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
MSI1O43347 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.32■□□□□ 0.36
MSI1O43347 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.32■□□□□ 0.36
MSI1O43347 AC004461.1-201ENST00000412461 403 ntBASIC17.32■□□□□ 0.36
MSI1O43347 TFAMP1-201ENST00000412727 736 ntBASIC17.32■□□□□ 0.36
MSI1O43347 CNN2P11-201ENST00000429351 262 ntBASIC17.32■□□□□ 0.36
MSI1O43347 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
MSI1O43347 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.32■□□□□ 0.36
MSI1O43347 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.32■□□□□ 0.36
MSI1O43347 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.32■□□□□ 0.36
MSI1O43347 SNHG9-202ENST00000564014 471 ntBASIC17.32■□□□□ 0.36
MSI1O43347 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.32■□□□□ 0.36
MSI1O43347 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.32■□□□□ 0.36
MSI1O43347 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
MSI1O43347 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.32■□□□□ 0.36
MSI1O43347 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MSI1O43347 AC026120.1-201ENST00000611536 926 ntBASIC17.32■□□□□ 0.36
MSI1O43347 AL513210.1-201ENST00000629608 234 ntBASIC17.32■□□□□ 0.36
MSI1O43347 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MSI1O43347 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MSI1O43347 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
MSI1O43347 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.32■□□□□ 0.36
MSI1O43347 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
MSI1O43347 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MSI1O43347 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.32■□□□□ 0.36
MSI1O43347 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.31■□□□□ 0.36
MSI1O43347 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
MSI1O43347 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MSI1O43347 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.31■□□□□ 0.36
MSI1O43347 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.31■□□□□ 0.36
MSI1O43347 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MSI1O43347 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.31■□□□□ 0.36
MSI1O43347 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MSI1O43347 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
MSI1O43347 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MSI1O43347 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MSI1O43347 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.31■□□□□ 0.36
MSI1O43347 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.31■□□□□ 0.36
MSI1O43347 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms