Protein–RNA interactions for Protein: A0AVI4

TMEM129, E3 ubiquitin-protein ligase TM129, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM129A0AVI4 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMEM129A0AVI4 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
TMEM129A0AVI4 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMEM129A0AVI4 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMEM129A0AVI4 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
TMEM129A0AVI4 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMEM129A0AVI4 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
TMEM129A0AVI4 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMEM129A0AVI4 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMEM129A0AVI4 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.17■□□□□ 0.02
TMEM129A0AVI4 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMEM129A0AVI4 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMEM129A0AVI4 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TMEM129A0AVI4 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMEM129A0AVI4 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.17■□□□□ 0.02
TMEM129A0AVI4 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.17■□□□□ 0.02
TMEM129A0AVI4 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMEM129A0AVI4 MRPL3P1-201ENST00000400109 1033 ntBASIC15.17■□□□□ 0.02
TMEM129A0AVI4 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC15.17■□□□□ 0.02
TMEM129A0AVI4 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.17■□□□□ 0.02
TMEM129A0AVI4 AC008608.2-201ENST00000606089 416 ntBASIC15.17■□□□□ 0.02
TMEM129A0AVI4 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TMEM129A0AVI4 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMEM129A0AVI4 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TMEM129A0AVI4 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TMEM129A0AVI4 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.17■□□□□ 0.02
TMEM129A0AVI4 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
TMEM129A0AVI4 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TMEM129A0AVI4 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMEM129A0AVI4 AC092384.3-202ENST00000564646 2873 ntBASIC15.17■□□□□ 0.02
TMEM129A0AVI4 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMEM129A0AVI4 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.17■□□□□ 0.02
TMEM129A0AVI4 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.17■□□□□ 0.02
TMEM129A0AVI4 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMEM129A0AVI4 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
TMEM129A0AVI4 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TMEM129A0AVI4 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TMEM129A0AVI4 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TMEM129A0AVI4 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.16■□□□□ 0.02
TMEM129A0AVI4 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM129A0AVI4 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.16■□□□□ 0.02
TMEM129A0AVI4 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM129A0AVI4 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM129A0AVI4 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.16■□□□□ 0.02
TMEM129A0AVI4 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.16■□□□□ 0.02
TMEM129A0AVI4 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM129A0AVI4 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.16■□□□□ 0.02
TMEM129A0AVI4 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM129A0AVI4 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM129A0AVI4 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
TMEM129A0AVI4 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM129A0AVI4 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.16■□□□□ 0.02
TMEM129A0AVI4 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.16■□□□□ 0.02
TMEM129A0AVI4 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.16■□□□□ 0.02
TMEM129A0AVI4 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM129A0AVI4 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM129A0AVI4 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
TMEM129A0AVI4 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TMEM129A0AVI4 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM129A0AVI4 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
TMEM129A0AVI4 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM129A0AVI4 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM129A0AVI4 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
TMEM129A0AVI4 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.16■□□□□ 0.02
TMEM129A0AVI4 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.16■□□□□ 0.02
TMEM129A0AVI4 FGFR3P6-201ENST00000457012 610 ntBASIC15.16■□□□□ 0.02
TMEM129A0AVI4 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.16■□□□□ 0.02
TMEM129A0AVI4 STK19B-204ENST00000512515 211 ntBASIC15.16■□□□□ 0.02
TMEM129A0AVI4 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM129A0AVI4 SLC25A6P4-201ENST00000586535 553 ntBASIC15.16■□□□□ 0.02
TMEM129A0AVI4 MTDHP3-201ENST00000594186 672 ntBASIC15.16■□□□□ 0.02
TMEM129A0AVI4 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.16■□□□□ 0.02
TMEM129A0AVI4 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TMEM129A0AVI4 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM129A0AVI4 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM129A0AVI4 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM129A0AVI4 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM129A0AVI4 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM129A0AVI4 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM129A0AVI4 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM129A0AVI4 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM129A0AVI4 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.16■□□□□ 0.02
TMEM129A0AVI4 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TMEM129A0AVI4 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM129A0AVI4 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM129A0AVI4 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM129A0AVI4 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM129A0AVI4 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM129A0AVI4 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM129A0AVI4 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM129A0AVI4 HYMAI-201ENST00000635591 3347 ntBASIC15.15■□□□□ 0.02
TMEM129A0AVI4 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM129A0AVI4 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM129A0AVI4 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TMEM129A0AVI4 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.15■□□□□ 0.02
TMEM129A0AVI4 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TMEM129A0AVI4 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.15■□□□□ 0.02
TMEM129A0AVI4 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TMEM129A0AVI4 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.15■□□□□ 0.02
TMEM129A0AVI4 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms