Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
DDX49Q9Y6V7 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
DDX49Q9Y6V7 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DDX49Q9Y6V7 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
DDX49Q9Y6V7 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DDX49Q9Y6V7 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
DDX49Q9Y6V7 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DDX49Q9Y6V7 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
DDX49Q9Y6V7 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DDX49Q9Y6V7 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC20.17■□□□□ 0.82
DDX49Q9Y6V7 ADM-208ENST00000534464 1640 ntTSL 2 BASIC20.17■□□□□ 0.82
DDX49Q9Y6V7 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DDX49Q9Y6V7 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC20.17■□□□□ 0.82
DDX49Q9Y6V7 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
DDX49Q9Y6V7 SLC25A1P3-201ENST00000395415 828 ntBASIC20.17■□□□□ 0.82
DDX49Q9Y6V7 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.17■□□□□ 0.82
DDX49Q9Y6V7 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC20.17■□□□□ 0.82
DDX49Q9Y6V7 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC20.17■□□□□ 0.82
DDX49Q9Y6V7 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DDX49Q9Y6V7 CD63-204ENST00000546939 779 ntTSL 3 BASIC20.17■□□□□ 0.82
DDX49Q9Y6V7 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC20.17■□□□□ 0.82
DDX49Q9Y6V7 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC20.17■□□□□ 0.82
DDX49Q9Y6V7 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.17■□□□□ 0.82
DDX49Q9Y6V7 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
DDX49Q9Y6V7 AL356488.2-201ENST00000602755 427 ntBASIC20.17■□□□□ 0.82
DDX49Q9Y6V7 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
DDX49Q9Y6V7 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DDX49Q9Y6V7 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
DDX49Q9Y6V7 PMS2P7-201ENST00000506558 1336 ntBASIC20.17■□□□□ 0.82
DDX49Q9Y6V7 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
DDX49Q9Y6V7 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC20.17■□□□□ 0.82
DDX49Q9Y6V7 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
DDX49Q9Y6V7 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
DDX49Q9Y6V7 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
DDX49Q9Y6V7 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC20.17■□□□□ 0.82
DDX49Q9Y6V7 AL513523.2-202ENST00000427283 2040 ntBASIC20.17■□□□□ 0.82
DDX49Q9Y6V7 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DDX49Q9Y6V7 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DDX49Q9Y6V7 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC20.17■□□□□ 0.82
DDX49Q9Y6V7 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC20.17■□□□□ 0.82
DDX49Q9Y6V7 PMPCAP1-201ENST00000508114 1576 ntBASIC20.17■□□□□ 0.82
DDX49Q9Y6V7 MYB-201ENST00000316528 3571 ntTSL 5 BASIC20.16■□□□□ 0.82
DDX49Q9Y6V7 MYB-241ENST00000616088 3573 ntTSL 5 BASIC20.16■□□□□ 0.82
DDX49Q9Y6V7 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC20.16■□□□□ 0.82
DDX49Q9Y6V7 PAUPAR-201ENST00000630360 2965 ntBASIC20.16■□□□□ 0.82
DDX49Q9Y6V7 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DDX49Q9Y6V7 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
DDX49Q9Y6V7 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
DDX49Q9Y6V7 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC20.16■□□□□ 0.82
DDX49Q9Y6V7 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
DDX49Q9Y6V7 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
DDX49Q9Y6V7 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
DDX49Q9Y6V7 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC20.16■□□□□ 0.82
DDX49Q9Y6V7 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC20.16■□□□□ 0.82
DDX49Q9Y6V7 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
DDX49Q9Y6V7 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
DDX49Q9Y6V7 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
DDX49Q9Y6V7 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
DDX49Q9Y6V7 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
DDX49Q9Y6V7 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DDX49Q9Y6V7 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
DDX49Q9Y6V7 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
DDX49Q9Y6V7 CTNS-203ENST00000399306 803 ntTSL 3 BASIC20.16■□□□□ 0.82
DDX49Q9Y6V7 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC20.16■□□□□ 0.82
DDX49Q9Y6V7 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC20.16■□□□□ 0.82
DDX49Q9Y6V7 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC20.16■□□□□ 0.82
DDX49Q9Y6V7 AC145285.3-201ENST00000564603 959 ntBASIC20.16■□□□□ 0.82
DDX49Q9Y6V7 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
DDX49Q9Y6V7 AL139327.4-201ENST00000612362 153 ntBASIC20.16■□□□□ 0.82
DDX49Q9Y6V7 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC20.16■□□□□ 0.82
DDX49Q9Y6V7 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
DDX49Q9Y6V7 AC008735.5-201ENST00000623544 497 ntBASIC20.16■□□□□ 0.82
DDX49Q9Y6V7 AL139288.1-201ENST00000623748 933 ntBASIC20.16■□□□□ 0.82
DDX49Q9Y6V7 AC117500.6-201ENST00000624871 588 ntBASIC20.16■□□□□ 0.82
DDX49Q9Y6V7 ZNF259P1-201ENST00000407656 1365 ntBASIC20.16■□□□□ 0.82
DDX49Q9Y6V7 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
DDX49Q9Y6V7 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
DDX49Q9Y6V7 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DDX49Q9Y6V7 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
DDX49Q9Y6V7 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC20.16■□□□□ 0.82
DDX49Q9Y6V7 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DDX49Q9Y6V7 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DDX49Q9Y6V7 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
DDX49Q9Y6V7 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
DDX49Q9Y6V7 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DDX49Q9Y6V7 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
DDX49Q9Y6V7 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DDX49Q9Y6V7 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
DDX49Q9Y6V7 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
DDX49Q9Y6V7 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
DDX49Q9Y6V7 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DDX49Q9Y6V7 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC20.15■□□□□ 0.82
DDX49Q9Y6V7 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
DDX49Q9Y6V7 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC20.15■□□□□ 0.82
DDX49Q9Y6V7 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC20.15■□□□□ 0.82
DDX49Q9Y6V7 AC096633.1-201ENST00000422446 749 ntBASIC20.15■□□□□ 0.82
DDX49Q9Y6V7 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC20.15■□□□□ 0.82
DDX49Q9Y6V7 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC20.15■□□□□ 0.82
DDX49Q9Y6V7 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
DDX49Q9Y6V7 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms