Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLIC4Q9Y696 AL353732.1-201ENST00000569618 1459 ntBASIC19.1■□□□□ 0.65
CLIC4Q9Y696 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC19.1■□□□□ 0.65
CLIC4Q9Y696 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLIC4Q9Y696 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLIC4Q9Y696 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC19.1■□□□□ 0.65
CLIC4Q9Y696 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.1■□□□□ 0.65
CLIC4Q9Y696 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CLIC4Q9Y696 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CLIC4Q9Y696 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLIC4Q9Y696 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLIC4Q9Y696 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC19.1■□□□□ 0.65
CLIC4Q9Y696 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLIC4Q9Y696 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CLIC4Q9Y696 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLIC4Q9Y696 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.1■□□□□ 0.65
CLIC4Q9Y696 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLIC4Q9Y696 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.1■□□□□ 0.65
CLIC4Q9Y696 AC105339.3-201ENST00000560043 636 ntBASIC19.1■□□□□ 0.65
CLIC4Q9Y696 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.1■□□□□ 0.65
CLIC4Q9Y696 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLIC4Q9Y696 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.1■□□□□ 0.65
CLIC4Q9Y696 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.1■□□□□ 0.65
CLIC4Q9Y696 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC19.1■□□□□ 0.65
CLIC4Q9Y696 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLIC4Q9Y696 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CLIC4Q9Y696 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CLIC4Q9Y696 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC19.1■□□□□ 0.65
CLIC4Q9Y696 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLIC4Q9Y696 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLIC4Q9Y696 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CLIC4Q9Y696 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC19.1■□□□□ 0.65
CLIC4Q9Y696 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLIC4Q9Y696 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLIC4Q9Y696 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLIC4Q9Y696 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC19.09■□□□□ 0.65
CLIC4Q9Y696 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLIC4Q9Y696 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.09■□□□□ 0.65
CLIC4Q9Y696 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC19.09■□□□□ 0.65
CLIC4Q9Y696 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
CLIC4Q9Y696 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CLIC4Q9Y696 AC046158.3-201ENST00000624947 2558 ntBASIC19.09■□□□□ 0.65
CLIC4Q9Y696 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CLIC4Q9Y696 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLIC4Q9Y696 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLIC4Q9Y696 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
CLIC4Q9Y696 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLIC4Q9Y696 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLIC4Q9Y696 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC19.09■□□□□ 0.65
CLIC4Q9Y696 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLIC4Q9Y696 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLIC4Q9Y696 BLK-205ENST00000529894 2017 ntTSL 5 BASIC19.09■□□□□ 0.65
CLIC4Q9Y696 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLIC4Q9Y696 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CLIC4Q9Y696 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.09■□□□□ 0.65
CLIC4Q9Y696 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLIC4Q9Y696 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.09■□□□□ 0.65
CLIC4Q9Y696 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19.09■□□□□ 0.65
CLIC4Q9Y696 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLIC4Q9Y696 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CLIC4Q9Y696 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLIC4Q9Y696 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC19.09■□□□□ 0.65
CLIC4Q9Y696 MTHFR-217ENST00000641820 1569 ntBASIC19.09■□□□□ 0.65
CLIC4Q9Y696 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLIC4Q9Y696 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CLIC4Q9Y696 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLIC4Q9Y696 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLIC4Q9Y696 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CLIC4Q9Y696 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC19.08■□□□□ 0.65
CLIC4Q9Y696 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CLIC4Q9Y696 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CLIC4Q9Y696 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLIC4Q9Y696 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLIC4Q9Y696 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLIC4Q9Y696 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
CLIC4Q9Y696 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.08■□□□□ 0.64
CLIC4Q9Y696 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CLIC4Q9Y696 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLIC4Q9Y696 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
CLIC4Q9Y696 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC19.08■□□□□ 0.64
CLIC4Q9Y696 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.08■□□□□ 0.64
CLIC4Q9Y696 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.08■□□□□ 0.64
CLIC4Q9Y696 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.08■□□□□ 0.64
CLIC4Q9Y696 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.08■□□□□ 0.64
CLIC4Q9Y696 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC19.08■□□□□ 0.64
CLIC4Q9Y696 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CLIC4Q9Y696 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.64
CLIC4Q9Y696 AL049840.3-201ENST00000602669 611 ntBASIC19.08■□□□□ 0.64
CLIC4Q9Y696 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.08■□□□□ 0.64
CLIC4Q9Y696 AC004790.2-201ENST00000623588 572 ntBASIC19.08■□□□□ 0.64
CLIC4Q9Y696 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CLIC4Q9Y696 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLIC4Q9Y696 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLIC4Q9Y696 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CLIC4Q9Y696 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLIC4Q9Y696 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLIC4Q9Y696 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC19.08■□□□□ 0.64
CLIC4Q9Y696 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLIC4Q9Y696 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC19.08■□□□□ 0.64
CLIC4Q9Y696 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms