Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGB6Q9Y5F9 AL603756.1-201ENST00000606511 2163 ntBASIC15.9■□□□□ 0.14
PCDHGB6Q9Y5F9 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGB6Q9Y5F9 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGB6Q9Y5F9 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.9■□□□□ 0.14
PCDHGB6Q9Y5F9 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGB6Q9Y5F9 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGB6Q9Y5F9 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGB6Q9Y5F9 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGB6Q9Y5F9 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB6Q9Y5F9 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
PCDHGB6Q9Y5F9 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB6Q9Y5F9 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
PCDHGB6Q9Y5F9 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB6Q9Y5F9 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB6Q9Y5F9 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB6Q9Y5F9 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB6Q9Y5F9 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB6Q9Y5F9 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB6Q9Y5F9 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDHGB6Q9Y5F9 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
PCDHGB6Q9Y5F9 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB6Q9Y5F9 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.89■□□□□ 0.13
PCDHGB6Q9Y5F9 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB6Q9Y5F9 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB6Q9Y5F9 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB6Q9Y5F9 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB6Q9Y5F9 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB6Q9Y5F9 AP002414.1-201ENST00000391405 1147 ntBASIC15.89■□□□□ 0.13
PCDHGB6Q9Y5F9 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDHGB6Q9Y5F9 MCCD1P2-201ENST00000423228 335 ntBASIC15.89■□□□□ 0.13
PCDHGB6Q9Y5F9 ACTG1P4-201ENST00000425123 1122 ntBASIC15.89■□□□□ 0.13
PCDHGB6Q9Y5F9 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.89■□□□□ 0.13
PCDHGB6Q9Y5F9 VN2R19P-201ENST00000442399 1052 ntBASIC15.89■□□□□ 0.13
PCDHGB6Q9Y5F9 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.89■□□□□ 0.13
PCDHGB6Q9Y5F9 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.89■□□□□ 0.13
PCDHGB6Q9Y5F9 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.89■□□□□ 0.13
PCDHGB6Q9Y5F9 AL353135.1-201ENST00000606729 504 ntBASIC15.89■□□□□ 0.13
PCDHGB6Q9Y5F9 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.89■□□□□ 0.13
PCDHGB6Q9Y5F9 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB6Q9Y5F9 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB6Q9Y5F9 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDHGB6Q9Y5F9 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
PCDHGB6Q9Y5F9 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB6Q9Y5F9 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
PCDHGB6Q9Y5F9 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB6Q9Y5F9 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB6Q9Y5F9 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB6Q9Y5F9 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB6Q9Y5F9 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB6Q9Y5F9 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB6Q9Y5F9 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
PCDHGB6Q9Y5F9 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
PCDHGB6Q9Y5F9 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.89■□□□□ 0.13
PCDHGB6Q9Y5F9 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB6Q9Y5F9 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.89■□□□□ 0.13
PCDHGB6Q9Y5F9 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB6Q9Y5F9 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
PCDHGB6Q9Y5F9 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB6Q9Y5F9 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDHGB6Q9Y5F9 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDHGB6Q9Y5F9 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGB6Q9Y5F9 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDHGB6Q9Y5F9 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
PCDHGB6Q9Y5F9 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
PCDHGB6Q9Y5F9 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDHGB6Q9Y5F9 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGB6Q9Y5F9 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGB6Q9Y5F9 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.88■□□□□ 0.13
PCDHGB6Q9Y5F9 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGB6Q9Y5F9 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDHGB6Q9Y5F9 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.88■□□□□ 0.13
PCDHGB6Q9Y5F9 AC108073.2-201ENST00000464002 357 ntBASIC15.88■□□□□ 0.13
PCDHGB6Q9Y5F9 AC112482.1-201ENST00000492080 688 ntBASIC15.88■□□□□ 0.13
PCDHGB6Q9Y5F9 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.88■□□□□ 0.13
PCDHGB6Q9Y5F9 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.88■□□□□ 0.13
PCDHGB6Q9Y5F9 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.88■□□□□ 0.13
PCDHGB6Q9Y5F9 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDHGB6Q9Y5F9 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.88■□□□□ 0.13
PCDHGB6Q9Y5F9 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.88■□□□□ 0.13
PCDHGB6Q9Y5F9 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.88■□□□□ 0.13
PCDHGB6Q9Y5F9 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGB6Q9Y5F9 AC026691.1-201ENST00000602502 2017 ntBASIC15.88■□□□□ 0.13
PCDHGB6Q9Y5F9 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGB6Q9Y5F9 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PCDHGB6Q9Y5F9 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDHGB6Q9Y5F9 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGB6Q9Y5F9 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGB6Q9Y5F9 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGB6Q9Y5F9 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDHGB6Q9Y5F9 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDHGB6Q9Y5F9 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PCDHGB6Q9Y5F9 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
PCDHGB6Q9Y5F9 HYMAI-201ENST00000635591 3347 ntBASIC15.88■□□□□ 0.13
PCDHGB6Q9Y5F9 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGB6Q9Y5F9 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGB6Q9Y5F9 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGB6Q9Y5F9 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.87■□□□□ 0.13
PCDHGB6Q9Y5F9 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.87■□□□□ 0.13
PCDHGB6Q9Y5F9 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms