Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AF228730.8-201ENST00000642140 221 ntBASIC14.86□□□□□ -0.03
CLCF1Q9UBD9 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLCF1Q9UBD9 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC14.86□□□□□ -0.03
CLCF1Q9UBD9 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC14.86□□□□□ -0.03
CLCF1Q9UBD9 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLCF1Q9UBD9 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CLCF1Q9UBD9 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CLCF1Q9UBD9 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CLCF1Q9UBD9 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.86□□□□□ -0.03
CLCF1Q9UBD9 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLCF1Q9UBD9 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLCF1Q9UBD9 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CLCF1Q9UBD9 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLCF1Q9UBD9 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CLCF1Q9UBD9 PCDHB17P-201ENST00000539533 2393 ntBASIC14.85□□□□□ -0.03
CLCF1Q9UBD9 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLCF1Q9UBD9 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CLCF1Q9UBD9 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLCF1Q9UBD9 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLCF1Q9UBD9 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLCF1Q9UBD9 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
CLCF1Q9UBD9 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CLCF1Q9UBD9 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLCF1Q9UBD9 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.85□□□□□ -0.03
CLCF1Q9UBD9 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.85□□□□□ -0.03
CLCF1Q9UBD9 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CLCF1Q9UBD9 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.85□□□□□ -0.03
CLCF1Q9UBD9 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.85□□□□□ -0.03
CLCF1Q9UBD9 HMGN1P19-201ENST00000436976 333 ntBASIC14.85□□□□□ -0.03
CLCF1Q9UBD9 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.85□□□□□ -0.03
CLCF1Q9UBD9 AP002490.2-201ENST00000524791 560 ntBASIC14.85□□□□□ -0.03
CLCF1Q9UBD9 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CLCF1Q9UBD9 AC025678.2-201ENST00000562061 970 ntBASIC14.85□□□□□ -0.03
CLCF1Q9UBD9 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.85□□□□□ -0.03
CLCF1Q9UBD9 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.85□□□□□ -0.03
CLCF1Q9UBD9 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.85□□□□□ -0.03
CLCF1Q9UBD9 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.85□□□□□ -0.03
CLCF1Q9UBD9 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.85□□□□□ -0.03
CLCF1Q9UBD9 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CLCF1Q9UBD9 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLCF1Q9UBD9 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLCF1Q9UBD9 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CLCF1Q9UBD9 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLCF1Q9UBD9 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLCF1Q9UBD9 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLCF1Q9UBD9 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.85□□□□□ -0.03
CLCF1Q9UBD9 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.85□□□□□ -0.03
CLCF1Q9UBD9 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLCF1Q9UBD9 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLCF1Q9UBD9 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.85□□□□□ -0.03
CLCF1Q9UBD9 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CLCF1Q9UBD9 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLCF1Q9UBD9 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLCF1Q9UBD9 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLCF1Q9UBD9 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
CLCF1Q9UBD9 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLCF1Q9UBD9 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC14.85□□□□□ -0.03
CLCF1Q9UBD9 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLCF1Q9UBD9 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CLCF1Q9UBD9 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CLCF1Q9UBD9 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC14.84□□□□□ -0.03
CLCF1Q9UBD9 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLCF1Q9UBD9 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC14.84□□□□□ -0.03
CLCF1Q9UBD9 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CLCF1Q9UBD9 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC14.84□□□□□ -0.03
CLCF1Q9UBD9 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLCF1Q9UBD9 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC14.84□□□□□ -0.03
CLCF1Q9UBD9 SNX33P1-201ENST00000592116 1762 ntBASIC14.84□□□□□ -0.03
CLCF1Q9UBD9 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLCF1Q9UBD9 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
CLCF1Q9UBD9 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLCF1Q9UBD9 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CLCF1Q9UBD9 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.84□□□□□ -0.03
CLCF1Q9UBD9 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CLCF1Q9UBD9 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.84□□□□□ -0.03
CLCF1Q9UBD9 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.84□□□□□ -0.03
CLCF1Q9UBD9 GPS2P2-201ENST00000430745 888 ntBASIC14.84□□□□□ -0.03
CLCF1Q9UBD9 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CLCF1Q9UBD9 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.84□□□□□ -0.03
CLCF1Q9UBD9 AC106028.4-201ENST00000614509 607 ntBASIC14.84□□□□□ -0.03
CLCF1Q9UBD9 AL645608.8-201ENST00000606034 2086 ntBASIC14.84□□□□□ -0.03
CLCF1Q9UBD9 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLCF1Q9UBD9 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CLCF1Q9UBD9 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLCF1Q9UBD9 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.84□□□□□ -0.03
CLCF1Q9UBD9 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLCF1Q9UBD9 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC14.84□□□□□ -0.03
CLCF1Q9UBD9 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CLCF1Q9UBD9 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CLCF1Q9UBD9 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLCF1Q9UBD9 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CLCF1Q9UBD9 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CLCF1Q9UBD9 AC060834.1-201ENST00000443027 2032 ntBASIC14.83□□□□□ -0.03
CLCF1Q9UBD9 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.83□□□□□ -0.03
CLCF1Q9UBD9 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.83□□□□□ -0.03
CLCF1Q9UBD9 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
CLCF1Q9UBD9 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CLCF1Q9UBD9 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLCF1Q9UBD9 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLCF1Q9UBD9 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms