Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
TLR9Q9NR96 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TLR9Q9NR96 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TLR9Q9NR96 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TLR9Q9NR96 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.65■□□□□ 0.42
TLR9Q9NR96 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TLR9Q9NR96 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
TLR9Q9NR96 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TLR9Q9NR96 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TLR9Q9NR96 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TLR9Q9NR96 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
TLR9Q9NR96 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
TLR9Q9NR96 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
TLR9Q9NR96 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TLR9Q9NR96 AC138932.1-201ENST00000534164 6830 ntBASIC17.64■□□□□ 0.41
TLR9Q9NR96 AC007541.1-201ENST00000570282 1469 ntBASIC17.64■□□□□ 0.41
TLR9Q9NR96 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
TLR9Q9NR96 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
TLR9Q9NR96 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TLR9Q9NR96 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TLR9Q9NR96 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TLR9Q9NR96 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17.64■□□□□ 0.41
TLR9Q9NR96 PTPA-220ENST00000436883 532 ntTSL 4 BASIC17.64■□□□□ 0.41
TLR9Q9NR96 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
TLR9Q9NR96 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
TLR9Q9NR96 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.64■□□□□ 0.41
TLR9Q9NR96 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.64■□□□□ 0.41
TLR9Q9NR96 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.64■□□□□ 0.41
TLR9Q9NR96 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TLR9Q9NR96 AL844908.2-201ENST00000609461 460 ntBASIC17.64■□□□□ 0.41
TLR9Q9NR96 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
TLR9Q9NR96 SPTSSB-204ENST00000617024 1292 ntBASIC17.64■□□□□ 0.41
TLR9Q9NR96 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TLR9Q9NR96 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TLR9Q9NR96 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TLR9Q9NR96 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TLR9Q9NR96 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TLR9Q9NR96 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TLR9Q9NR96 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TLR9Q9NR96 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TLR9Q9NR96 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
TLR9Q9NR96 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
TLR9Q9NR96 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TLR9Q9NR96 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TLR9Q9NR96 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TLR9Q9NR96 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.64■□□□□ 0.41
TLR9Q9NR96 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TLR9Q9NR96 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.63■□□□□ 0.41
TLR9Q9NR96 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TLR9Q9NR96 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.63■□□□□ 0.41
TLR9Q9NR96 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
TLR9Q9NR96 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.63■□□□□ 0.41
TLR9Q9NR96 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TLR9Q9NR96 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TLR9Q9NR96 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TLR9Q9NR96 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC17.63■□□□□ 0.41
TLR9Q9NR96 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC17.63■□□□□ 0.41
TLR9Q9NR96 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
TLR9Q9NR96 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TLR9Q9NR96 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.63■□□□□ 0.41
TLR9Q9NR96 RPL37AP1-201ENST00000412502 279 ntBASIC17.63■□□□□ 0.41
TLR9Q9NR96 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
TLR9Q9NR96 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.63■□□□□ 0.41
TLR9Q9NR96 AL353779.1-201ENST00000434793 351 ntBASIC17.63■□□□□ 0.41
TLR9Q9NR96 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TLR9Q9NR96 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.63■□□□□ 0.41
TLR9Q9NR96 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.63■□□□□ 0.41
TLR9Q9NR96 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.63■□□□□ 0.41
TLR9Q9NR96 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC17.63■□□□□ 0.41
TLR9Q9NR96 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC17.63■□□□□ 0.41
TLR9Q9NR96 AC140912.1-201ENST00000577171 1054 ntBASIC17.63■□□□□ 0.41
TLR9Q9NR96 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TLR9Q9NR96 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC17.63■□□□□ 0.41
TLR9Q9NR96 RN7SL828P-201ENST00000607615 303 ntBASIC17.63■□□□□ 0.41
TLR9Q9NR96 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
TLR9Q9NR96 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TLR9Q9NR96 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.63■□□□□ 0.41
TLR9Q9NR96 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TLR9Q9NR96 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.63■□□□□ 0.41
TLR9Q9NR96 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TLR9Q9NR96 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TLR9Q9NR96 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TLR9Q9NR96 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
TLR9Q9NR96 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.63■□□□□ 0.41
TLR9Q9NR96 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TLR9Q9NR96 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.63■□□□□ 0.41
TLR9Q9NR96 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
TLR9Q9NR96 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TLR9Q9NR96 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.62■□□□□ 0.41
TLR9Q9NR96 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.62■□□□□ 0.41
TLR9Q9NR96 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
TLR9Q9NR96 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC17.62■□□□□ 0.41
TLR9Q9NR96 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC17.62■□□□□ 0.41
TLR9Q9NR96 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.62■□□□□ 0.41
TLR9Q9NR96 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC17.62■□□□□ 0.41
TLR9Q9NR96 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.62■□□□□ 0.41
TLR9Q9NR96 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC17.62■□□□□ 0.41
TLR9Q9NR96 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.62■□□□□ 0.41
TLR9Q9NR96 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.62■□□□□ 0.41
TLR9Q9NR96 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms