Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
KIAA1549Q9HCM3 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.82□□□□□ -0.04
KIAA1549Q9HCM3 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.82□□□□□ -0.04
KIAA1549Q9HCM3 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
KIAA1549Q9HCM3 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
KIAA1549Q9HCM3 MIR6080-201ENST00000617359 66 ntBASIC14.82□□□□□ -0.04
KIAA1549Q9HCM3 AC084121.4-201ENST00000641598 221 ntBASIC14.82□□□□□ -0.04
KIAA1549Q9HCM3 MTHFR-217ENST00000641820 1569 ntBASIC14.82□□□□□ -0.04
KIAA1549Q9HCM3 AF228730.8-201ENST00000642140 221 ntBASIC14.82□□□□□ -0.04
KIAA1549Q9HCM3 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
KIAA1549Q9HCM3 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KIAA1549Q9HCM3 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
KIAA1549Q9HCM3 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KIAA1549Q9HCM3 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
KIAA1549Q9HCM3 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KIAA1549Q9HCM3 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
KIAA1549Q9HCM3 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KIAA1549Q9HCM3 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KIAA1549Q9HCM3 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KIAA1549Q9HCM3 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
KIAA1549Q9HCM3 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KIAA1549Q9HCM3 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KIAA1549Q9HCM3 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC14.81□□□□□ -0.04
KIAA1549Q9HCM3 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
KIAA1549Q9HCM3 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
KIAA1549Q9HCM3 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.81□□□□□ -0.04
KIAA1549Q9HCM3 AL035633.1-201ENST00000406139 838 ntBASIC14.81□□□□□ -0.04
KIAA1549Q9HCM3 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.81□□□□□ -0.04
KIAA1549Q9HCM3 SPCS2P4-201ENST00000436160 681 ntBASIC14.81□□□□□ -0.04
KIAA1549Q9HCM3 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.81□□□□□ -0.04
KIAA1549Q9HCM3 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.81□□□□□ -0.04
KIAA1549Q9HCM3 AC105233.2-201ENST00000523697 349 ntBASIC14.81□□□□□ -0.04
KIAA1549Q9HCM3 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.81□□□□□ -0.04
KIAA1549Q9HCM3 AF228730.5-201ENST00000530288 346 ntBASIC14.81□□□□□ -0.04
KIAA1549Q9HCM3 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.81□□□□□ -0.04
KIAA1549Q9HCM3 DUX4L27-201ENST00000554796 1261 ntBASIC14.81□□□□□ -0.04
KIAA1549Q9HCM3 AC026150.2-201ENST00000564693 1156 ntBASIC14.81□□□□□ -0.04
KIAA1549Q9HCM3 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.81□□□□□ -0.04
KIAA1549Q9HCM3 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.81□□□□□ -0.04
KIAA1549Q9HCM3 STX6-204ENST00000542060 4809 ntTSL 2 BASIC14.81□□□□□ -0.04
KIAA1549Q9HCM3 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KIAA1549Q9HCM3 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
KIAA1549Q9HCM3 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KIAA1549Q9HCM3 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
KIAA1549Q9HCM3 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
KIAA1549Q9HCM3 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KIAA1549Q9HCM3 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
KIAA1549Q9HCM3 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
KIAA1549Q9HCM3 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
KIAA1549Q9HCM3 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC14.8□□□□□ -0.04
KIAA1549Q9HCM3 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
KIAA1549Q9HCM3 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.8□□□□□ -0.04
KIAA1549Q9HCM3 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.8□□□□□ -0.04
KIAA1549Q9HCM3 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
KIAA1549Q9HCM3 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.8□□□□□ -0.04
KIAA1549Q9HCM3 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.8□□□□□ -0.04
KIAA1549Q9HCM3 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.8□□□□□ -0.04
KIAA1549Q9HCM3 FAM86GP-201ENST00000448322 971 ntBASIC14.8□□□□□ -0.04
KIAA1549Q9HCM3 AC245100.5-201ENST00000452108 331 ntBASIC14.8□□□□□ -0.04
KIAA1549Q9HCM3 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.8□□□□□ -0.04
KIAA1549Q9HCM3 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
KIAA1549Q9HCM3 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.8□□□□□ -0.04
KIAA1549Q9HCM3 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
KIAA1549Q9HCM3 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
KIAA1549Q9HCM3 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
KIAA1549Q9HCM3 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.8□□□□□ -0.04
KIAA1549Q9HCM3 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.8□□□□□ -0.04
KIAA1549Q9HCM3 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
KIAA1549Q9HCM3 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
KIAA1549Q9HCM3 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
KIAA1549Q9HCM3 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
KIAA1549Q9HCM3 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
KIAA1549Q9HCM3 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
KIAA1549Q9HCM3 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.8□□□□□ -0.04
KIAA1549Q9HCM3 FAM220BP-201ENST00000377689 816 ntBASIC14.8□□□□□ -0.04
KIAA1549Q9HCM3 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
KIAA1549Q9HCM3 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
KIAA1549Q9HCM3 FAM8A3P-201ENST00000427218 844 ntBASIC14.8□□□□□ -0.04
KIAA1549Q9HCM3 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.8□□□□□ -0.04
KIAA1549Q9HCM3 ALG1L8P-201ENST00000533887 760 ntBASIC14.8□□□□□ -0.04
KIAA1549Q9HCM3 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.8□□□□□ -0.04
KIAA1549Q9HCM3 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.8□□□□□ -0.04
KIAA1549Q9HCM3 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.8□□□□□ -0.04
KIAA1549Q9HCM3 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.8□□□□□ -0.04
KIAA1549Q9HCM3 AC008267.7-201ENST00000624570 1194 ntBASIC14.8□□□□□ -0.04
KIAA1549Q9HCM3 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
KIAA1549Q9HCM3 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
KIAA1549Q9HCM3 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
KIAA1549Q9HCM3 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14.79□□□□□ -0.04
KIAA1549Q9HCM3 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
KIAA1549Q9HCM3 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.79□□□□□ -0.04
KIAA1549Q9HCM3 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
KIAA1549Q9HCM3 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
KIAA1549Q9HCM3 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KIAA1549Q9HCM3 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
KIAA1549Q9HCM3 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC14.79□□□□□ -0.04
KIAA1549Q9HCM3 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KIAA1549Q9HCM3 MIR661-201ENST00000384842 89 ntBASIC14.79□□□□□ -0.04
KIAA1549Q9HCM3 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.79□□□□□ -0.04
KIAA1549Q9HCM3 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms