Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC20.61■□□□□ 0.89
UPF2Q9HAU5 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC20.61■□□□□ 0.89
UPF2Q9HAU5 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
UPF2Q9HAU5 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UPF2Q9HAU5 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
UPF2Q9HAU5 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
UPF2Q9HAU5 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
UPF2Q9HAU5 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
UPF2Q9HAU5 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UPF2Q9HAU5 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.61■□□□□ 0.89
UPF2Q9HAU5 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
UPF2Q9HAU5 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
UPF2Q9HAU5 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UPF2Q9HAU5 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
UPF2Q9HAU5 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.61■□□□□ 0.89
UPF2Q9HAU5 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UPF2Q9HAU5 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC20.61■□□□□ 0.89
UPF2Q9HAU5 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.61■□□□□ 0.89
UPF2Q9HAU5 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
UPF2Q9HAU5 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
UPF2Q9HAU5 BANP-201ENST00000286122 2368 ntTSL 5 BASIC20.61■□□□□ 0.89
UPF2Q9HAU5 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UPF2Q9HAU5 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UPF2Q9HAU5 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
UPF2Q9HAU5 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UPF2Q9HAU5 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
UPF2Q9HAU5 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
UPF2Q9HAU5 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC20.61■□□□□ 0.89
UPF2Q9HAU5 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UPF2Q9HAU5 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC20.61■□□□□ 0.89
UPF2Q9HAU5 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UPF2Q9HAU5 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC20.6■□□□□ 0.89
UPF2Q9HAU5 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
UPF2Q9HAU5 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
UPF2Q9HAU5 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
UPF2Q9HAU5 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
UPF2Q9HAU5 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UPF2Q9HAU5 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
UPF2Q9HAU5 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
UPF2Q9HAU5 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UPF2Q9HAU5 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
UPF2Q9HAU5 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
UPF2Q9HAU5 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UPF2Q9HAU5 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
UPF2Q9HAU5 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
UPF2Q9HAU5 AK4P3-201ENST00000418260 669 ntBASIC20.6■□□□□ 0.89
UPF2Q9HAU5 SPDYE13P-201ENST00000445314 798 ntBASIC20.6■□□□□ 0.89
UPF2Q9HAU5 SIGLEC30P-201ENST00000455569 941 ntBASIC20.6■□□□□ 0.89
UPF2Q9HAU5 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.6■□□□□ 0.89
UPF2Q9HAU5 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.6■□□□□ 0.89
UPF2Q9HAU5 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
UPF2Q9HAU5 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC20.6■□□□□ 0.89
UPF2Q9HAU5 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.6■□□□□ 0.89
UPF2Q9HAU5 AC011467.2-201ENST00000598425 242 ntBASIC20.6■□□□□ 0.89
UPF2Q9HAU5 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
UPF2Q9HAU5 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC20.6■□□□□ 0.89
UPF2Q9HAU5 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC20.6■□□□□ 0.89
UPF2Q9HAU5 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
UPF2Q9HAU5 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UPF2Q9HAU5 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
UPF2Q9HAU5 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
UPF2Q9HAU5 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UPF2Q9HAU5 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC20.6■□□□□ 0.89
UPF2Q9HAU5 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC20.6■□□□□ 0.89
UPF2Q9HAU5 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UPF2Q9HAU5 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UPF2Q9HAU5 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
UPF2Q9HAU5 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
UPF2Q9HAU5 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC20.59■□□□□ 0.89
UPF2Q9HAU5 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
UPF2Q9HAU5 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
UPF2Q9HAU5 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UPF2Q9HAU5 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
UPF2Q9HAU5 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC20.59■□□□□ 0.89
UPF2Q9HAU5 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UPF2Q9HAU5 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
UPF2Q9HAU5 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UPF2Q9HAU5 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.59■□□□□ 0.89
UPF2Q9HAU5 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
UPF2Q9HAU5 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
UPF2Q9HAU5 DUX4L17-201ENST00000557360 1267 ntBASIC20.59■□□□□ 0.89
UPF2Q9HAU5 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UPF2Q9HAU5 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.59■□□□□ 0.89
UPF2Q9HAU5 AL139011.1-202ENST00000642063 584 ntBASIC20.59■□□□□ 0.89
UPF2Q9HAU5 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
UPF2Q9HAU5 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC20.59■□□□□ 0.89
UPF2Q9HAU5 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UPF2Q9HAU5 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UPF2Q9HAU5 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UPF2Q9HAU5 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
UPF2Q9HAU5 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
UPF2Q9HAU5 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC20.59■□□□□ 0.89
UPF2Q9HAU5 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UPF2Q9HAU5 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
UPF2Q9HAU5 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC20.59■□□□□ 0.89
UPF2Q9HAU5 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UPF2Q9HAU5 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UPF2Q9HAU5 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
UPF2Q9HAU5 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC20.58■□□□□ 0.89
UPF2Q9HAU5 AC103702.1-201ENST00000548801 2630 ntBASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms