Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEC22CQ9BRL7 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEC22CQ9BRL7 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SEC22CQ9BRL7 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEC22CQ9BRL7 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SEC22CQ9BRL7 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SEC22CQ9BRL7 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC22CQ9BRL7 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC22CQ9BRL7 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC22CQ9BRL7 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
SEC22CQ9BRL7 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC22CQ9BRL7 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC14.19□□□□□ -0.14
SEC22CQ9BRL7 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC22CQ9BRL7 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SEC22CQ9BRL7 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC22CQ9BRL7 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.19□□□□□ -0.14
SEC22CQ9BRL7 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SEC22CQ9BRL7 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
SEC22CQ9BRL7 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.19□□□□□ -0.14
SEC22CQ9BRL7 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
SEC22CQ9BRL7 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SEC22CQ9BRL7 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC22CQ9BRL7 AC006449.6-201ENST00000612330 2296 ntBASIC14.19□□□□□ -0.14
SEC22CQ9BRL7 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC22CQ9BRL7 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SEC22CQ9BRL7 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC22CQ9BRL7 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC22CQ9BRL7 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC22CQ9BRL7 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC14.19□□□□□ -0.14
SEC22CQ9BRL7 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SEC22CQ9BRL7 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
SEC22CQ9BRL7 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC22CQ9BRL7 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.19□□□□□ -0.14
SEC22CQ9BRL7 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC22CQ9BRL7 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC22CQ9BRL7 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
SEC22CQ9BRL7 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SEC22CQ9BRL7 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC22CQ9BRL7 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.19□□□□□ -0.14
SEC22CQ9BRL7 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SEC22CQ9BRL7 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC22CQ9BRL7 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC22CQ9BRL7 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SEC22CQ9BRL7 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SEC22CQ9BRL7 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC22CQ9BRL7 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.19□□□□□ -0.14
SEC22CQ9BRL7 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
SEC22CQ9BRL7 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC22CQ9BRL7 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
SEC22CQ9BRL7 AL161772.1-201ENST00000610494 4412 ntBASIC14.18□□□□□ -0.14
SEC22CQ9BRL7 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SEC22CQ9BRL7 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SEC22CQ9BRL7 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SEC22CQ9BRL7 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SEC22CQ9BRL7 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SEC22CQ9BRL7 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SEC22CQ9BRL7 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SEC22CQ9BRL7 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SEC22CQ9BRL7 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SEC22CQ9BRL7 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SEC22CQ9BRL7 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SEC22CQ9BRL7 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
SEC22CQ9BRL7 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SEC22CQ9BRL7 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SEC22CQ9BRL7 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.18□□□□□ -0.14
SEC22CQ9BRL7 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SEC22CQ9BRL7 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SEC22CQ9BRL7 AC079781.5-202ENST00000641784 3743 ntBASIC14.18□□□□□ -0.14
SEC22CQ9BRL7 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SEC22CQ9BRL7 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SEC22CQ9BRL7 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC14.18□□□□□ -0.14
SEC22CQ9BRL7 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SEC22CQ9BRL7 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC14.18□□□□□ -0.14
SEC22CQ9BRL7 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
SEC22CQ9BRL7 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SEC22CQ9BRL7 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
SEC22CQ9BRL7 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC14.18□□□□□ -0.14
SEC22CQ9BRL7 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC14.18□□□□□ -0.14
SEC22CQ9BRL7 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SEC22CQ9BRL7 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC14.18□□□□□ -0.14
SEC22CQ9BRL7 C1QBPP2-201ENST00000528754 825 ntBASIC14.18□□□□□ -0.14
SEC22CQ9BRL7 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.18□□□□□ -0.14
SEC22CQ9BRL7 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC14.18□□□□□ -0.14
SEC22CQ9BRL7 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC14.18□□□□□ -0.14
SEC22CQ9BRL7 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SEC22CQ9BRL7 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SEC22CQ9BRL7 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.18□□□□□ -0.14
SEC22CQ9BRL7 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SEC22CQ9BRL7 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SEC22CQ9BRL7 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SEC22CQ9BRL7 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SEC22CQ9BRL7 AL137784.3-201ENST00000623858 2288 ntBASIC14.18□□□□□ -0.14
SEC22CQ9BRL7 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SEC22CQ9BRL7 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.18□□□□□ -0.14
SEC22CQ9BRL7 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SEC22CQ9BRL7 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SEC22CQ9BRL7 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.18□□□□□ -0.14
SEC22CQ9BRL7 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SEC22CQ9BRL7 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SEC22CQ9BRL7 KRT89P-201ENST00000620027 1478 ntBASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms