Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.87■□□□□ 0.13
COL21A1Q96P44 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL21A1Q96P44 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
COL21A1Q96P44 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL21A1Q96P44 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL21A1Q96P44 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.87■□□□□ 0.13
COL21A1Q96P44 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
COL21A1Q96P44 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
COL21A1Q96P44 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL21A1Q96P44 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.87■□□□□ 0.13
COL21A1Q96P44 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.87■□□□□ 0.13
COL21A1Q96P44 AL031284.1-201ENST00000419297 478 ntBASIC15.87■□□□□ 0.13
COL21A1Q96P44 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.87■□□□□ 0.13
COL21A1Q96P44 AC093909.1-201ENST00000504731 1122 ntBASIC15.87■□□□□ 0.13
COL21A1Q96P44 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.87■□□□□ 0.13
COL21A1Q96P44 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
COL21A1Q96P44 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL21A1Q96P44 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.87■□□□□ 0.13
COL21A1Q96P44 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
COL21A1Q96P44 AP001005.1-201ENST00000571755 1248 ntBASIC15.87■□□□□ 0.13
COL21A1Q96P44 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
COL21A1Q96P44 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.87■□□□□ 0.13
COL21A1Q96P44 AC008735.5-201ENST00000623544 497 ntBASIC15.87■□□□□ 0.13
COL21A1Q96P44 FAM215A-202ENST00000632077 792 ntBASIC15.87■□□□□ 0.13
COL21A1Q96P44 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL21A1Q96P44 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
COL21A1Q96P44 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.87■□□□□ 0.13
COL21A1Q96P44 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL21A1Q96P44 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.87■□□□□ 0.13
COL21A1Q96P44 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
COL21A1Q96P44 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.87■□□□□ 0.13
COL21A1Q96P44 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
COL21A1Q96P44 TUBB8P12-201ENST00000308911 1335 ntBASIC15.87■□□□□ 0.13
COL21A1Q96P44 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL21A1Q96P44 TUBB7P-202ENST00000428444 1305 ntBASIC15.87■□□□□ 0.13
COL21A1Q96P44 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.87■□□□□ 0.13
COL21A1Q96P44 TUBB8P7-204ENST00000567960 1332 ntBASIC15.87■□□□□ 0.13
COL21A1Q96P44 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL21A1Q96P44 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.87■□□□□ 0.13
COL21A1Q96P44 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL21A1Q96P44 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL21A1Q96P44 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.87■□□□□ 0.13
COL21A1Q96P44 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL21A1Q96P44 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL21A1Q96P44 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL21A1Q96P44 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL21A1Q96P44 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL21A1Q96P44 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.87■□□□□ 0.13
COL21A1Q96P44 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COL21A1Q96P44 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
COL21A1Q96P44 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
COL21A1Q96P44 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
COL21A1Q96P44 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COL21A1Q96P44 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
COL21A1Q96P44 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
COL21A1Q96P44 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.86■□□□□ 0.13
COL21A1Q96P44 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
COL21A1Q96P44 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COL21A1Q96P44 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COL21A1Q96P44 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
COL21A1Q96P44 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
COL21A1Q96P44 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
COL21A1Q96P44 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.86■□□□□ 0.13
COL21A1Q96P44 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
COL21A1Q96P44 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COL21A1Q96P44 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
COL21A1Q96P44 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.86■□□□□ 0.13
COL21A1Q96P44 AC026396.1-201ENST00000419388 421 ntBASIC15.86■□□□□ 0.13
COL21A1Q96P44 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
COL21A1Q96P44 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.86■□□□□ 0.13
COL21A1Q96P44 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
COL21A1Q96P44 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.86■□□□□ 0.13
COL21A1Q96P44 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
COL21A1Q96P44 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.86■□□□□ 0.13
COL21A1Q96P44 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.86■□□□□ 0.13
COL21A1Q96P44 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.86■□□□□ 0.13
COL21A1Q96P44 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.86■□□□□ 0.13
COL21A1Q96P44 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.86■□□□□ 0.13
COL21A1Q96P44 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COL21A1Q96P44 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.86■□□□□ 0.13
COL21A1Q96P44 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
COL21A1Q96P44 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COL21A1Q96P44 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.86■□□□□ 0.13
COL21A1Q96P44 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COL21A1Q96P44 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.86■□□□□ 0.13
COL21A1Q96P44 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
COL21A1Q96P44 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.86■□□□□ 0.13
COL21A1Q96P44 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.86■□□□□ 0.13
COL21A1Q96P44 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.86■□□□□ 0.13
COL21A1Q96P44 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.86■□□□□ 0.13
COL21A1Q96P44 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
COL21A1Q96P44 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
COL21A1Q96P44 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
COL21A1Q96P44 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COL21A1Q96P44 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL21A1Q96P44 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.85■□□□□ 0.13
COL21A1Q96P44 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
COL21A1Q96P44 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.85■□□□□ 0.13
COL21A1Q96P44 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
COL21A1Q96P44 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms