Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
AP3S1Q92572 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.8□□□□□ -0.04
AP3S1Q92572 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.8□□□□□ -0.04
AP3S1Q92572 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP3S1Q92572 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP3S1Q92572 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP3S1Q92572 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP3S1Q92572 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
AP3S1Q92572 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC14.8□□□□□ -0.04
AP3S1Q92572 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC14.8□□□□□ -0.04
AP3S1Q92572 KRT18P48-201ENST00000434763 852 ntBASIC14.8□□□□□ -0.04
AP3S1Q92572 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC14.8□□□□□ -0.04
AP3S1Q92572 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP3S1Q92572 ADM-205ENST00000528544 586 ntTSL 2 BASIC14.8□□□□□ -0.04
AP3S1Q92572 PPOX-214ENST00000535223 664 ntTSL 3 BASIC14.8□□□□□ -0.04
AP3S1Q92572 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC14.8□□□□□ -0.04
AP3S1Q92572 KLF13-207ENST00000560473 489 ntTSL 3 BASIC14.8□□□□□ -0.04
AP3S1Q92572 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC14.8□□□□□ -0.04
AP3S1Q92572 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP3S1Q92572 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
AP3S1Q92572 AC006058.3-201ENST00000606217 1069 ntBASIC14.8□□□□□ -0.04
AP3S1Q92572 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
AP3S1Q92572 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP3S1Q92572 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
AP3S1Q92572 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
AP3S1Q92572 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP3S1Q92572 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP3S1Q92572 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP3S1Q92572 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP3S1Q92572 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
AP3S1Q92572 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
AP3S1Q92572 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.8□□□□□ -0.04
AP3S1Q92572 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.8□□□□□ -0.04
AP3S1Q92572 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP3S1Q92572 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
AP3S1Q92572 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.8□□□□□ -0.04
AP3S1Q92572 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.8□□□□□ -0.04
AP3S1Q92572 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP3S1Q92572 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
AP3S1Q92572 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.8□□□□□ -0.04
AP3S1Q92572 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
AP3S1Q92572 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AP3S1Q92572 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AP3S1Q92572 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.79□□□□□ -0.04
AP3S1Q92572 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.79□□□□□ -0.04
AP3S1Q92572 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AP3S1Q92572 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AP3S1Q92572 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AP3S1Q92572 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
AP3S1Q92572 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AP3S1Q92572 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AP3S1Q92572 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
AP3S1Q92572 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.79□□□□□ -0.04
AP3S1Q92572 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AP3S1Q92572 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
AP3S1Q92572 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
AP3S1Q92572 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
AP3S1Q92572 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
AP3S1Q92572 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC14.79□□□□□ -0.04
AP3S1Q92572 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
AP3S1Q92572 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
AP3S1Q92572 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.79□□□□□ -0.04
AP3S1Q92572 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC14.79□□□□□ -0.04
AP3S1Q92572 ECEL1P2-202ENST00000465689 757 ntBASIC14.79□□□□□ -0.04
AP3S1Q92572 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC14.79□□□□□ -0.04
AP3S1Q92572 AC034232.1-201ENST00000506026 1064 ntBASIC14.79□□□□□ -0.04
AP3S1Q92572 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC14.79□□□□□ -0.04
AP3S1Q92572 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
AP3S1Q92572 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
AP3S1Q92572 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
AP3S1Q92572 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC14.79□□□□□ -0.04
AP3S1Q92572 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
AP3S1Q92572 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.79□□□□□ -0.04
AP3S1Q92572 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
AP3S1Q92572 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
AP3S1Q92572 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC14.79□□□□□ -0.04
AP3S1Q92572 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC14.79□□□□□ -0.04
AP3S1Q92572 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AP3S1Q92572 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.79□□□□□ -0.04
AP3S1Q92572 AL139011.1-202ENST00000642063 584 ntBASIC14.79□□□□□ -0.04
AP3S1Q92572 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AP3S1Q92572 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AP3S1Q92572 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AP3S1Q92572 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
AP3S1Q92572 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.79□□□□□ -0.04
AP3S1Q92572 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AP3S1Q92572 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.79□□□□□ -0.04
AP3S1Q92572 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.78□□□□□ -0.04
AP3S1Q92572 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.78□□□□□ -0.04
AP3S1Q92572 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.78□□□□□ -0.04
AP3S1Q92572 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
AP3S1Q92572 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP3S1Q92572 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC14.78□□□□□ -0.04
AP3S1Q92572 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP3S1Q92572 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP3S1Q92572 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
AP3S1Q92572 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
AP3S1Q92572 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP3S1Q92572 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
AP3S1Q92572 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms