Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
RAB3IL1Q8TBN0 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
RAB3IL1Q8TBN0 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RAB3IL1Q8TBN0 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB3IL1Q8TBN0 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RAB3IL1Q8TBN0 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB3IL1Q8TBN0 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.76■□□□□ 0.27
RAB3IL1Q8TBN0 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.76■□□□□ 0.27
RAB3IL1Q8TBN0 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.76■□□□□ 0.27
RAB3IL1Q8TBN0 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.76■□□□□ 0.27
RAB3IL1Q8TBN0 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB3IL1Q8TBN0 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RAB3IL1Q8TBN0 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB3IL1Q8TBN0 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB3IL1Q8TBN0 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB3IL1Q8TBN0 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
RAB3IL1Q8TBN0 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.76■□□□□ 0.27
RAB3IL1Q8TBN0 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.76■□□□□ 0.27
RAB3IL1Q8TBN0 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB3IL1Q8TBN0 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB3IL1Q8TBN0 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.76■□□□□ 0.27
RAB3IL1Q8TBN0 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
RAB3IL1Q8TBN0 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB3IL1Q8TBN0 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB3IL1Q8TBN0 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.76■□□□□ 0.27
RAB3IL1Q8TBN0 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB3IL1Q8TBN0 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.76■□□□□ 0.27
RAB3IL1Q8TBN0 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.76■□□□□ 0.27
RAB3IL1Q8TBN0 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
RAB3IL1Q8TBN0 AL049597.2-201ENST00000565575 961 ntBASIC16.76■□□□□ 0.27
RAB3IL1Q8TBN0 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.76■□□□□ 0.27
RAB3IL1Q8TBN0 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RAB3IL1Q8TBN0 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB3IL1Q8TBN0 AC011558.1-201ENST00000623459 338 ntBASIC16.76■□□□□ 0.27
RAB3IL1Q8TBN0 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RAB3IL1Q8TBN0 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB3IL1Q8TBN0 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RAB3IL1Q8TBN0 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.76■□□□□ 0.27
RAB3IL1Q8TBN0 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC16.76■□□□□ 0.27
RAB3IL1Q8TBN0 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB3IL1Q8TBN0 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB3IL1Q8TBN0 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.76■□□□□ 0.27
RAB3IL1Q8TBN0 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB3IL1Q8TBN0 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
RAB3IL1Q8TBN0 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RAB3IL1Q8TBN0 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
RAB3IL1Q8TBN0 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RAB3IL1Q8TBN0 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB3IL1Q8TBN0 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB3IL1Q8TBN0 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RAB3IL1Q8TBN0 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
RAB3IL1Q8TBN0 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB3IL1Q8TBN0 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.76■□□□□ 0.27
RAB3IL1Q8TBN0 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB3IL1Q8TBN0 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB3IL1Q8TBN0 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB3IL1Q8TBN0 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB3IL1Q8TBN0 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB3IL1Q8TBN0 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAB3IL1Q8TBN0 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAB3IL1Q8TBN0 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB3IL1Q8TBN0 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB3IL1Q8TBN0 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB3IL1Q8TBN0 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
RAB3IL1Q8TBN0 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.75■□□□□ 0.27
RAB3IL1Q8TBN0 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB3IL1Q8TBN0 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB3IL1Q8TBN0 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB3IL1Q8TBN0 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAB3IL1Q8TBN0 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB3IL1Q8TBN0 KLF4P1-201ENST00000412782 1185 ntBASIC16.75■□□□□ 0.27
RAB3IL1Q8TBN0 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
RAB3IL1Q8TBN0 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.75■□□□□ 0.27
RAB3IL1Q8TBN0 KRT18P35-201ENST00000510488 1269 ntBASIC16.75■□□□□ 0.27
RAB3IL1Q8TBN0 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.75■□□□□ 0.27
RAB3IL1Q8TBN0 RNF126P1-202ENST00000569893 925 ntBASIC16.75■□□□□ 0.27
RAB3IL1Q8TBN0 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.75■□□□□ 0.27
RAB3IL1Q8TBN0 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.75■□□□□ 0.27
RAB3IL1Q8TBN0 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.75■□□□□ 0.27
RAB3IL1Q8TBN0 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB3IL1Q8TBN0 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAB3IL1Q8TBN0 AL161772.1-201ENST00000610494 4412 ntBASIC16.75■□□□□ 0.27
RAB3IL1Q8TBN0 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAB3IL1Q8TBN0 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB3IL1Q8TBN0 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB3IL1Q8TBN0 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC16.75■□□□□ 0.27
RAB3IL1Q8TBN0 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.75■□□□□ 0.27
RAB3IL1Q8TBN0 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB3IL1Q8TBN0 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
RAB3IL1Q8TBN0 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
RAB3IL1Q8TBN0 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.75■□□□□ 0.27
RAB3IL1Q8TBN0 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB3IL1Q8TBN0 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.75■□□□□ 0.27
RAB3IL1Q8TBN0 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.75■□□□□ 0.27
RAB3IL1Q8TBN0 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.75■□□□□ 0.27
RAB3IL1Q8TBN0 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB3IL1Q8TBN0 AC132938.5-201ENST00000624980 1813 ntBASIC16.75■□□□□ 0.27
RAB3IL1Q8TBN0 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
RAB3IL1Q8TBN0 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB3IL1Q8TBN0 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms