Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDH19Q8TAB3 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDH19Q8TAB3 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDH19Q8TAB3 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.27■□□□□ 0.36
PCDH19Q8TAB3 VN2R19P-201ENST00000442399 1052 ntBASIC17.27■□□□□ 0.36
PCDH19Q8TAB3 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDH19Q8TAB3 CXCL1P1-201ENST00000502804 216 ntBASIC17.27■□□□□ 0.36
PCDH19Q8TAB3 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.27■□□□□ 0.36
PCDH19Q8TAB3 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.27■□□□□ 0.36
PCDH19Q8TAB3 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDH19Q8TAB3 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PCDH19Q8TAB3 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDH19Q8TAB3 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
PCDH19Q8TAB3 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDH19Q8TAB3 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDH19Q8TAB3 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDH19Q8TAB3 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
PCDH19Q8TAB3 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDH19Q8TAB3 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
PCDH19Q8TAB3 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDH19Q8TAB3 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.27■□□□□ 0.35
PCDH19Q8TAB3 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PCDH19Q8TAB3 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDH19Q8TAB3 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.27■□□□□ 0.35
PCDH19Q8TAB3 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDH19Q8TAB3 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
PCDH19Q8TAB3 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH19Q8TAB3 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH19Q8TAB3 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH19Q8TAB3 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
PCDH19Q8TAB3 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH19Q8TAB3 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PCDH19Q8TAB3 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH19Q8TAB3 KRT18P13-201ENST00000400056 1290 ntBASIC17.26■□□□□ 0.35
PCDH19Q8TAB3 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PCDH19Q8TAB3 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
PCDH19Q8TAB3 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDH19Q8TAB3 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDH19Q8TAB3 AC145285.3-201ENST00000564603 959 ntBASIC17.26■□□□□ 0.35
PCDH19Q8TAB3 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH19Q8TAB3 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH19Q8TAB3 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH19Q8TAB3 AP001350.2-201ENST00000625104 1094 ntBASIC17.26■□□□□ 0.35
PCDH19Q8TAB3 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDH19Q8TAB3 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH19Q8TAB3 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH19Q8TAB3 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH19Q8TAB3 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH19Q8TAB3 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDH19Q8TAB3 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.26■□□□□ 0.35
PCDH19Q8TAB3 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH19Q8TAB3 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PCDH19Q8TAB3 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH19Q8TAB3 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
PCDH19Q8TAB3 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDH19Q8TAB3 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH19Q8TAB3 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDH19Q8TAB3 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.25■□□□□ 0.35
PCDH19Q8TAB3 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH19Q8TAB3 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH19Q8TAB3 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.25■□□□□ 0.35
PCDH19Q8TAB3 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH19Q8TAB3 PMS2P7-201ENST00000506558 1336 ntBASIC17.25■□□□□ 0.35
PCDH19Q8TAB3 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PCDH19Q8TAB3 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PCDH19Q8TAB3 AC018695.7-201ENST00000624587 2492 ntBASIC17.25■□□□□ 0.35
PCDH19Q8TAB3 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH19Q8TAB3 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
PCDH19Q8TAB3 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH19Q8TAB3 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PCDH19Q8TAB3 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH19Q8TAB3 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH19Q8TAB3 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH19Q8TAB3 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.25■□□□□ 0.35
PCDH19Q8TAB3 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.25■□□□□ 0.35
PCDH19Q8TAB3 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.25■□□□□ 0.35
PCDH19Q8TAB3 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDH19Q8TAB3 HCG4B-203ENST00000450128 991 ntBASIC17.25■□□□□ 0.35
PCDH19Q8TAB3 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDH19Q8TAB3 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.25■□□□□ 0.35
PCDH19Q8TAB3 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.25■□□□□ 0.35
PCDH19Q8TAB3 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH19Q8TAB3 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDH19Q8TAB3 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PCDH19Q8TAB3 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
PCDH19Q8TAB3 DOC2GP-204ENST00000639052 2548 ntBASIC17.25■□□□□ 0.35
PCDH19Q8TAB3 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH19Q8TAB3 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH19Q8TAB3 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.25■□□□□ 0.35
PCDH19Q8TAB3 AC012569.1-201ENST00000591191 1524 ntBASIC17.25■□□□□ 0.35
PCDH19Q8TAB3 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH19Q8TAB3 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDH19Q8TAB3 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDH19Q8TAB3 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH19Q8TAB3 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH19Q8TAB3 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH19Q8TAB3 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDH19Q8TAB3 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDH19Q8TAB3 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.25■□□□□ 0.35
PCDH19Q8TAB3 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms