Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC33Q8N5R6 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC33Q8N5R6 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.59■□□□□ 0.41
CCDC33Q8N5R6 PCDHA14-201ENST00000506751 2298 ntBASIC17.59■□□□□ 0.41
CCDC33Q8N5R6 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC33Q8N5R6 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC33Q8N5R6 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC33Q8N5R6 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC33Q8N5R6 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC33Q8N5R6 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC33Q8N5R6 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC33Q8N5R6 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.59■□□□□ 0.41
CCDC33Q8N5R6 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC33Q8N5R6 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC33Q8N5R6 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC33Q8N5R6 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.59■□□□□ 0.41
CCDC33Q8N5R6 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CCDC33Q8N5R6 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
CCDC33Q8N5R6 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC33Q8N5R6 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.59■□□□□ 0.41
CCDC33Q8N5R6 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.58■□□□□ 0.41
CCDC33Q8N5R6 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.58■□□□□ 0.41
CCDC33Q8N5R6 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC33Q8N5R6 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.58■□□□□ 0.41
CCDC33Q8N5R6 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.58■□□□□ 0.41
CCDC33Q8N5R6 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC33Q8N5R6 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC33Q8N5R6 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.58■□□□□ 0.4
CCDC33Q8N5R6 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC33Q8N5R6 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC33Q8N5R6 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC33Q8N5R6 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC33Q8N5R6 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
CCDC33Q8N5R6 FAM58CP-201ENST00000435741 640 ntBASIC17.58■□□□□ 0.4
CCDC33Q8N5R6 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC33Q8N5R6 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.58■□□□□ 0.4
CCDC33Q8N5R6 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.58■□□□□ 0.4
CCDC33Q8N5R6 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.58■□□□□ 0.4
CCDC33Q8N5R6 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.58■□□□□ 0.4
CCDC33Q8N5R6 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.58■□□□□ 0.4
CCDC33Q8N5R6 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CCDC33Q8N5R6 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC33Q8N5R6 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC33Q8N5R6 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC33Q8N5R6 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC33Q8N5R6 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CCDC33Q8N5R6 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.58■□□□□ 0.4
CCDC33Q8N5R6 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.58■□□□□ 0.4
CCDC33Q8N5R6 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CCDC33Q8N5R6 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
CCDC33Q8N5R6 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC33Q8N5R6 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CCDC33Q8N5R6 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.57■□□□□ 0.4
CCDC33Q8N5R6 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC33Q8N5R6 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC33Q8N5R6 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC33Q8N5R6 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC33Q8N5R6 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC33Q8N5R6 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC33Q8N5R6 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC33Q8N5R6 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC33Q8N5R6 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC33Q8N5R6 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC33Q8N5R6 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
CCDC33Q8N5R6 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC33Q8N5R6 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC33Q8N5R6 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.57■□□□□ 0.4
CCDC33Q8N5R6 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC33Q8N5R6 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC33Q8N5R6 RFPL4AP1-201ENST00000530883 850 ntBASIC17.57■□□□□ 0.4
CCDC33Q8N5R6 AP002472.1-201ENST00000577490 586 ntBASIC17.57■□□□□ 0.4
CCDC33Q8N5R6 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.57■□□□□ 0.4
CCDC33Q8N5R6 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CCDC33Q8N5R6 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC33Q8N5R6 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC33Q8N5R6 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC33Q8N5R6 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CCDC33Q8N5R6 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC33Q8N5R6 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC33Q8N5R6 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.56■□□□□ 0.4
CCDC33Q8N5R6 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC33Q8N5R6 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC33Q8N5R6 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC33Q8N5R6 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC33Q8N5R6 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC33Q8N5R6 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CCDC33Q8N5R6 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC33Q8N5R6 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CCDC33Q8N5R6 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC33Q8N5R6 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC33Q8N5R6 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC33Q8N5R6 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
CCDC33Q8N5R6 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC33Q8N5R6 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC33Q8N5R6 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC33Q8N5R6 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.56■□□□□ 0.4
CCDC33Q8N5R6 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.56■□□□□ 0.4
CCDC33Q8N5R6 RHOQP3-201ENST00000437982 621 ntBASIC17.56■□□□□ 0.4
CCDC33Q8N5R6 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.56■□□□□ 0.4
CCDC33Q8N5R6 AC074386.1-202ENST00000463561 864 ntBASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms