Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC25.88■■□□□ 1.73
VPS8Q8N3P4 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
VPS8Q8N3P4 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
VPS8Q8N3P4 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC25.88■■□□□ 1.73
VPS8Q8N3P4 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
VPS8Q8N3P4 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
VPS8Q8N3P4 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
VPS8Q8N3P4 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC25.88■■□□□ 1.73
VPS8Q8N3P4 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
VPS8Q8N3P4 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
VPS8Q8N3P4 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
VPS8Q8N3P4 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
VPS8Q8N3P4 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
VPS8Q8N3P4 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
VPS8Q8N3P4 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
VPS8Q8N3P4 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
VPS8Q8N3P4 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
VPS8Q8N3P4 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
VPS8Q8N3P4 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
VPS8Q8N3P4 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC25.88■■□□□ 1.73
VPS8Q8N3P4 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC25.88■■□□□ 1.73
VPS8Q8N3P4 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC25.88■■□□□ 1.73
VPS8Q8N3P4 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC25.88■■□□□ 1.73
VPS8Q8N3P4 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC25.88■■□□□ 1.73
VPS8Q8N3P4 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
VPS8Q8N3P4 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
VPS8Q8N3P4 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
VPS8Q8N3P4 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
VPS8Q8N3P4 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
VPS8Q8N3P4 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
VPS8Q8N3P4 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC25.87■■□□□ 1.73
VPS8Q8N3P4 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC25.87■■□□□ 1.73
VPS8Q8N3P4 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
VPS8Q8N3P4 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC25.87■■□□□ 1.73
VPS8Q8N3P4 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC25.87■■□□□ 1.73
VPS8Q8N3P4 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
VPS8Q8N3P4 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
VPS8Q8N3P4 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC25.87■■□□□ 1.73
VPS8Q8N3P4 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
VPS8Q8N3P4 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC25.87■■□□□ 1.73
VPS8Q8N3P4 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC25.87■■□□□ 1.73
VPS8Q8N3P4 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC25.87■■□□□ 1.73
VPS8Q8N3P4 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC25.87■■□□□ 1.73
VPS8Q8N3P4 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC25.87■■□□□ 1.73
VPS8Q8N3P4 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
VPS8Q8N3P4 FZD10-202ENST00000539839 3282 ntBASIC25.86■■□□□ 1.73
VPS8Q8N3P4 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC25.86■■□□□ 1.73
VPS8Q8N3P4 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
VPS8Q8N3P4 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
VPS8Q8N3P4 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
VPS8Q8N3P4 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC25.86■■□□□ 1.73
VPS8Q8N3P4 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC25.86■■□□□ 1.73
VPS8Q8N3P4 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
VPS8Q8N3P4 HNRNPFP1-201ENST00000391730 1133 ntBASIC25.86■■□□□ 1.73
VPS8Q8N3P4 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
VPS8Q8N3P4 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
VPS8Q8N3P4 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC25.86■■□□□ 1.73
VPS8Q8N3P4 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC25.86■■□□□ 1.73
VPS8Q8N3P4 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
VPS8Q8N3P4 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
VPS8Q8N3P4 TUBB3P1-201ENST00000405796 1332 ntBASIC25.86■■□□□ 1.73
VPS8Q8N3P4 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC25.85■■□□□ 1.73
VPS8Q8N3P4 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
VPS8Q8N3P4 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC25.85■■□□□ 1.73
VPS8Q8N3P4 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
VPS8Q8N3P4 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC25.85■■□□□ 1.73
VPS8Q8N3P4 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
VPS8Q8N3P4 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC25.85■■□□□ 1.73
VPS8Q8N3P4 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
VPS8Q8N3P4 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC25.85■■□□□ 1.73
VPS8Q8N3P4 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC25.85■■□□□ 1.73
VPS8Q8N3P4 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
VPS8Q8N3P4 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC25.85■■□□□ 1.73
VPS8Q8N3P4 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
VPS8Q8N3P4 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC25.85■■□□□ 1.73
VPS8Q8N3P4 AC018529.1-201ENST00000613063 361 ntBASIC25.85■■□□□ 1.73
VPS8Q8N3P4 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
VPS8Q8N3P4 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
VPS8Q8N3P4 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
VPS8Q8N3P4 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
VPS8Q8N3P4 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
VPS8Q8N3P4 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
VPS8Q8N3P4 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
VPS8Q8N3P4 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC25.84■■□□□ 1.73
VPS8Q8N3P4 ME2P1-201ENST00000426028 1970 ntBASIC25.84■■□□□ 1.73
VPS8Q8N3P4 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
VPS8Q8N3P4 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC25.84■■□□□ 1.73
VPS8Q8N3P4 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
VPS8Q8N3P4 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
VPS8Q8N3P4 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC25.84■■□□□ 1.73
VPS8Q8N3P4 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC25.84■■□□□ 1.73
VPS8Q8N3P4 AC140878.1-201ENST00000565277 250 ntBASIC25.84■■□□□ 1.73
VPS8Q8N3P4 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
VPS8Q8N3P4 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
VPS8Q8N3P4 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
VPS8Q8N3P4 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC25.84■■□□□ 1.73
VPS8Q8N3P4 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC25.84■■□□□ 1.73
VPS8Q8N3P4 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
VPS8Q8N3P4 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC25.84■■□□□ 1.73
VPS8Q8N3P4 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms