Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCUBE3Q8IX30 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCUBE3Q8IX30 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCUBE3Q8IX30 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
SCUBE3Q8IX30 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.59■□□□□ 0.41
SCUBE3Q8IX30 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SCUBE3Q8IX30 PMS2P2-201ENST00000425039 1128 ntBASIC17.59■□□□□ 0.41
SCUBE3Q8IX30 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.59■□□□□ 0.41
SCUBE3Q8IX30 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.59■□□□□ 0.41
SCUBE3Q8IX30 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
SCUBE3Q8IX30 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.59■□□□□ 0.41
SCUBE3Q8IX30 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.59■□□□□ 0.41
SCUBE3Q8IX30 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.59■□□□□ 0.41
SCUBE3Q8IX30 Z99916.3-201ENST00000623422 1080 ntBASIC17.59■□□□□ 0.41
SCUBE3Q8IX30 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCUBE3Q8IX30 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCUBE3Q8IX30 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SCUBE3Q8IX30 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.59■□□□□ 0.41
SCUBE3Q8IX30 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.59■□□□□ 0.41
SCUBE3Q8IX30 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCUBE3Q8IX30 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SCUBE3Q8IX30 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCUBE3Q8IX30 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCUBE3Q8IX30 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCUBE3Q8IX30 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCUBE3Q8IX30 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SCUBE3Q8IX30 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCUBE3Q8IX30 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.58■□□□□ 0.41
SCUBE3Q8IX30 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SCUBE3Q8IX30 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
SCUBE3Q8IX30 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SCUBE3Q8IX30 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SCUBE3Q8IX30 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SCUBE3Q8IX30 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.58■□□□□ 0.4
SCUBE3Q8IX30 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.58■□□□□ 0.4
SCUBE3Q8IX30 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SCUBE3Q8IX30 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SCUBE3Q8IX30 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.58■□□□□ 0.4
SCUBE3Q8IX30 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SCUBE3Q8IX30 RNU1-129P-201ENST00000384064 167 ntBASIC17.58■□□□□ 0.4
SCUBE3Q8IX30 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.58■□□□□ 0.4
SCUBE3Q8IX30 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SCUBE3Q8IX30 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SCUBE3Q8IX30 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.58■□□□□ 0.4
SCUBE3Q8IX30 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.58■□□□□ 0.4
SCUBE3Q8IX30 U1.21-201ENST00000580816 167 ntBASIC17.58■□□□□ 0.4
SCUBE3Q8IX30 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SCUBE3Q8IX30 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
SCUBE3Q8IX30 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SCUBE3Q8IX30 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SCUBE3Q8IX30 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SCUBE3Q8IX30 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SCUBE3Q8IX30 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SCUBE3Q8IX30 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.58■□□□□ 0.4
SCUBE3Q8IX30 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCUBE3Q8IX30 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCUBE3Q8IX30 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
SCUBE3Q8IX30 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCUBE3Q8IX30 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCUBE3Q8IX30 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.57■□□□□ 0.4
SCUBE3Q8IX30 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.57■□□□□ 0.4
SCUBE3Q8IX30 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
SCUBE3Q8IX30 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCUBE3Q8IX30 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCUBE3Q8IX30 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCUBE3Q8IX30 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCUBE3Q8IX30 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
SCUBE3Q8IX30 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCUBE3Q8IX30 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.57■□□□□ 0.4
SCUBE3Q8IX30 AC140658.5-201ENST00000438532 169 ntBASIC17.57■□□□□ 0.4
SCUBE3Q8IX30 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
SCUBE3Q8IX30 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.57■□□□□ 0.4
SCUBE3Q8IX30 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SCUBE3Q8IX30 AC002347.1-201ENST00000569543 541 ntBASIC17.57■□□□□ 0.4
SCUBE3Q8IX30 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.57■□□□□ 0.4
SCUBE3Q8IX30 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.57■□□□□ 0.4
SCUBE3Q8IX30 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SCUBE3Q8IX30 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCUBE3Q8IX30 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCUBE3Q8IX30 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCUBE3Q8IX30 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SCUBE3Q8IX30 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCUBE3Q8IX30 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCUBE3Q8IX30 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SCUBE3Q8IX30 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
SCUBE3Q8IX30 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SCUBE3Q8IX30 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.57■□□□□ 0.4
SCUBE3Q8IX30 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCUBE3Q8IX30 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCUBE3Q8IX30 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCUBE3Q8IX30 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCUBE3Q8IX30 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCUBE3Q8IX30 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
SCUBE3Q8IX30 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCUBE3Q8IX30 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
SCUBE3Q8IX30 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.56■□□□□ 0.4
SCUBE3Q8IX30 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.56■□□□□ 0.4
SCUBE3Q8IX30 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SCUBE3Q8IX30 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
SCUBE3Q8IX30 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms