Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
COL23A1Q86Y22 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
COL23A1Q86Y22 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL23A1Q86Y22 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.7■□□□□ 0.9
COL23A1Q86Y22 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC20.7■□□□□ 0.9
COL23A1Q86Y22 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL23A1Q86Y22 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL23A1Q86Y22 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL23A1Q86Y22 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COL23A1Q86Y22 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL23A1Q86Y22 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COL23A1Q86Y22 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC20.7■□□□□ 0.9
COL23A1Q86Y22 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC20.7■□□□□ 0.9
COL23A1Q86Y22 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC20.7■□□□□ 0.9
COL23A1Q86Y22 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
COL23A1Q86Y22 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC20.7■□□□□ 0.9
COL23A1Q86Y22 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
COL23A1Q86Y22 AL139099.5-201ENST00000635274 300 ntBASIC20.7■□□□□ 0.9
COL23A1Q86Y22 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC20.7■□□□□ 0.9
COL23A1Q86Y22 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
COL23A1Q86Y22 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
COL23A1Q86Y22 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COL23A1Q86Y22 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC20.7■□□□□ 0.9
COL23A1Q86Y22 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
COL23A1Q86Y22 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL23A1Q86Y22 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COL23A1Q86Y22 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC20.69■□□□□ 0.9
COL23A1Q86Y22 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL23A1Q86Y22 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL23A1Q86Y22 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COL23A1Q86Y22 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL23A1Q86Y22 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL23A1Q86Y22 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL23A1Q86Y22 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC20.69■□□□□ 0.9
COL23A1Q86Y22 AC104596.2-201ENST00000512793 793 ntBASIC20.69■□□□□ 0.9
COL23A1Q86Y22 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC20.69■□□□□ 0.9
COL23A1Q86Y22 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC20.69■□□□□ 0.9
COL23A1Q86Y22 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COL23A1Q86Y22 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COL23A1Q86Y22 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC20.69■□□□□ 0.9
COL23A1Q86Y22 PIGL-212ENST00000581006 554 ntTSL 4 BASIC20.69■□□□□ 0.9
COL23A1Q86Y22 MIR3615-201ENST00000581999 87 ntBASIC20.69■□□□□ 0.9
COL23A1Q86Y22 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC20.69■□□□□ 0.9
COL23A1Q86Y22 RPS15-212ENST00000593052 629 ntTSL 2 BASIC20.69■□□□□ 0.9
COL23A1Q86Y22 AC026979.3-201ENST00000607315 403 ntBASIC20.69■□□□□ 0.9
COL23A1Q86Y22 TNXA-203ENST00000507684 2038 ntBASIC20.69■□□□□ 0.9
COL23A1Q86Y22 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.69■□□□□ 0.9
COL23A1Q86Y22 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL23A1Q86Y22 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL23A1Q86Y22 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL23A1Q86Y22 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL23A1Q86Y22 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL23A1Q86Y22 AC016396.2-201ENST00000562575 1417 ntBASIC20.69■□□□□ 0.9
COL23A1Q86Y22 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL23A1Q86Y22 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
COL23A1Q86Y22 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
COL23A1Q86Y22 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL23A1Q86Y22 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL23A1Q86Y22 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC20.68■□□□□ 0.9
COL23A1Q86Y22 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC20.68■□□□□ 0.9
COL23A1Q86Y22 SNX33P1-201ENST00000592116 1762 ntBASIC20.68■□□□□ 0.9
COL23A1Q86Y22 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL23A1Q86Y22 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL23A1Q86Y22 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
COL23A1Q86Y22 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC20.68■□□□□ 0.9
COL23A1Q86Y22 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
COL23A1Q86Y22 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
COL23A1Q86Y22 AC005229.1-201ENST00000392885 409 ntBASIC20.68■□□□□ 0.9
COL23A1Q86Y22 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
COL23A1Q86Y22 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
COL23A1Q86Y22 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC20.68■□□□□ 0.9
COL23A1Q86Y22 ABBA01031660.1-201ENST00000635219 756 ntBASIC20.68■□□□□ 0.9
COL23A1Q86Y22 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL23A1Q86Y22 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC20.68■□□□□ 0.9
COL23A1Q86Y22 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL23A1Q86Y22 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL23A1Q86Y22 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
COL23A1Q86Y22 AC009113.1-201ENST00000570267 2443 ntBASIC20.68■□□□□ 0.9
COL23A1Q86Y22 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL23A1Q86Y22 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
COL23A1Q86Y22 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
COL23A1Q86Y22 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC20.68■□□□□ 0.9
COL23A1Q86Y22 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.68■□□□□ 0.9
COL23A1Q86Y22 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
COL23A1Q86Y22 AL589702.1-201ENST00000641229 1509 ntBASIC20.68■□□□□ 0.9
COL23A1Q86Y22 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL23A1Q86Y22 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
COL23A1Q86Y22 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL23A1Q86Y22 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.67■□□□□ 0.9
COL23A1Q86Y22 ABALON-201ENST00000629058 1903 ntBASIC20.67■□□□□ 0.9
COL23A1Q86Y22 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.67■□□□□ 0.9
COL23A1Q86Y22 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COL23A1Q86Y22 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
COL23A1Q86Y22 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL23A1Q86Y22 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
COL23A1Q86Y22 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COL23A1Q86Y22 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL23A1Q86Y22 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
COL23A1Q86Y22 APOC3-202ENST00000375345 604 ntTSL 5 BASIC20.67■□□□□ 0.9
COL23A1Q86Y22 USB1-202ENST00000423271 1217 ntTSL 2 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms