Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
ZNF546Q86UE3 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF546Q86UE3 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF546Q86UE3 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF546Q86UE3 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.97□□□□□ -0.17
ZNF546Q86UE3 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF546Q86UE3 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
ZNF546Q86UE3 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
ZNF546Q86UE3 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.97□□□□□ -0.17
ZNF546Q86UE3 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF546Q86UE3 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF546Q86UE3 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF546Q86UE3 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF546Q86UE3 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF546Q86UE3 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF546Q86UE3 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF546Q86UE3 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF546Q86UE3 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.97□□□□□ -0.17
ZNF546Q86UE3 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
ZNF546Q86UE3 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF546Q86UE3 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC13.97□□□□□ -0.17
ZNF546Q86UE3 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
ZNF546Q86UE3 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF546Q86UE3 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC13.97□□□□□ -0.17
ZNF546Q86UE3 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC13.96□□□□□ -0.17
ZNF546Q86UE3 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
ZNF546Q86UE3 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ZNF546Q86UE3 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ZNF546Q86UE3 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ZNF546Q86UE3 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ZNF546Q86UE3 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
ZNF546Q86UE3 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ZNF546Q86UE3 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.96□□□□□ -0.17
ZNF546Q86UE3 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ZNF546Q86UE3 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.96□□□□□ -0.17
ZNF546Q86UE3 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ZNF546Q86UE3 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC13.96□□□□□ -0.17
ZNF546Q86UE3 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ZNF546Q86UE3 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ZNF546Q86UE3 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ZNF546Q86UE3 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.96□□□□□ -0.17
ZNF546Q86UE3 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ZNF546Q86UE3 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.96□□□□□ -0.17
ZNF546Q86UE3 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ZNF546Q86UE3 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ZNF546Q86UE3 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
ZNF546Q86UE3 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ZNF546Q86UE3 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.96□□□□□ -0.17
ZNF546Q86UE3 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
ZNF546Q86UE3 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
ZNF546Q86UE3 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.96□□□□□ -0.17
ZNF546Q86UE3 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ZNF546Q86UE3 ABHD17AP1-201ENST00000358206 933 ntBASIC13.96□□□□□ -0.17
ZNF546Q86UE3 HIST1H2APS4-201ENST00000362070 348 ntBASIC13.96□□□□□ -0.17
ZNF546Q86UE3 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ZNF546Q86UE3 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ZNF546Q86UE3 MYCLP1-201ENST00000372451 1075 ntBASIC13.96□□□□□ -0.17
ZNF546Q86UE3 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
ZNF546Q86UE3 AC012618.2-201ENST00000428058 849 ntBASIC13.96□□□□□ -0.17
ZNF546Q86UE3 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
ZNF546Q86UE3 HLA-J-202ENST00000469281 1241 ntBASIC13.96□□□□□ -0.17
ZNF546Q86UE3 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC13.96□□□□□ -0.17
ZNF546Q86UE3 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC13.96□□□□□ -0.17
ZNF546Q86UE3 TMED1-207ENST00000591695 809 ntTSL 5 BASIC13.96□□□□□ -0.17
ZNF546Q86UE3 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC13.96□□□□□ -0.17
ZNF546Q86UE3 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC13.96□□□□□ -0.17
ZNF546Q86UE3 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ZNF546Q86UE3 AC116562.4-202ENST00000641738 218 ntBASIC13.96□□□□□ -0.17
ZNF546Q86UE3 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
ZNF546Q86UE3 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
ZNF546Q86UE3 SP100-205ENST00000409824 1802 ntTSL 5 BASIC13.96□□□□□ -0.17
ZNF546Q86UE3 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ZNF546Q86UE3 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ZNF546Q86UE3 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.96□□□□□ -0.18
ZNF546Q86UE3 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
ZNF546Q86UE3 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
ZNF546Q86UE3 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
ZNF546Q86UE3 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.18
ZNF546Q86UE3 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
ZNF546Q86UE3 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ZNF546Q86UE3 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ZNF546Q86UE3 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.95□□□□□ -0.18
ZNF546Q86UE3 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
ZNF546Q86UE3 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ZNF546Q86UE3 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
ZNF546Q86UE3 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ZNF546Q86UE3 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
ZNF546Q86UE3 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ZNF546Q86UE3 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ZNF546Q86UE3 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
ZNF546Q86UE3 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
ZNF546Q86UE3 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ZNF546Q86UE3 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ZNF546Q86UE3 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ZNF546Q86UE3 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ZNF546Q86UE3 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ZNF546Q86UE3 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ZNF546Q86UE3 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.95□□□□□ -0.18
ZNF546Q86UE3 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ZNF546Q86UE3 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms