Protein–RNA interactions for Protein: Q6ZMN7

PDZRN4, PDZ domain-containing RING finger protein 4, humanhuman

Predicted RBP Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4Q6ZMN7 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDZRN4Q6ZMN7 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PDZRN4Q6ZMN7 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PDZRN4Q6ZMN7 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDZRN4Q6ZMN7 SAPCD2P3-201ENST00000455031 850 ntBASIC19.34■□□□□ 0.69
PDZRN4Q6ZMN7 AP002469.2-201ENST00000531724 424 ntBASIC19.34■□□□□ 0.69
PDZRN4Q6ZMN7 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
PDZRN4Q6ZMN7 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC19.34■□□□□ 0.69
PDZRN4Q6ZMN7 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.34■□□□□ 0.69
PDZRN4Q6ZMN7 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDZRN4Q6ZMN7 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
PDZRN4Q6ZMN7 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC19.34■□□□□ 0.69
PDZRN4Q6ZMN7 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDZRN4Q6ZMN7 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC19.34■□□□□ 0.69
PDZRN4Q6ZMN7 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
PDZRN4Q6ZMN7 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDZRN4Q6ZMN7 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDZRN4Q6ZMN7 CASK-202ENST00000378158 3848 ntTSL 5 BASIC19.34■□□□□ 0.69
PDZRN4Q6ZMN7 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PDZRN4Q6ZMN7 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDZRN4Q6ZMN7 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC19.34■□□□□ 0.69
PDZRN4Q6ZMN7 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PDZRN4Q6ZMN7 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC19.33■□□□□ 0.69
PDZRN4Q6ZMN7 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC19.33■□□□□ 0.69
PDZRN4Q6ZMN7 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PDZRN4Q6ZMN7 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC19.33■□□□□ 0.69
PDZRN4Q6ZMN7 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PDZRN4Q6ZMN7 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.33■□□□□ 0.69
PDZRN4Q6ZMN7 AMT-233ENST00000636522 1620 ntTSL 2 BASIC19.33■□□□□ 0.69
PDZRN4Q6ZMN7 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PDZRN4Q6ZMN7 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
PDZRN4Q6ZMN7 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
PDZRN4Q6ZMN7 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PDZRN4Q6ZMN7 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
PDZRN4Q6ZMN7 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PDZRN4Q6ZMN7 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PDZRN4Q6ZMN7 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.33■□□□□ 0.68
PDZRN4Q6ZMN7 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
PDZRN4Q6ZMN7 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.33■□□□□ 0.68
PDZRN4Q6ZMN7 AC096582.2-201ENST00000510860 516 ntBASIC19.33■□□□□ 0.68
PDZRN4Q6ZMN7 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
PDZRN4Q6ZMN7 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PDZRN4Q6ZMN7 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.33■□□□□ 0.68
PDZRN4Q6ZMN7 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.33■□□□□ 0.68
PDZRN4Q6ZMN7 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.33■□□□□ 0.68
PDZRN4Q6ZMN7 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
PDZRN4Q6ZMN7 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PDZRN4Q6ZMN7 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PDZRN4Q6ZMN7 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PDZRN4Q6ZMN7 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
PDZRN4Q6ZMN7 AC114341.1-201ENST00000618070 349 ntBASIC19.33■□□□□ 0.68
PDZRN4Q6ZMN7 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.33■□□□□ 0.68
PDZRN4Q6ZMN7 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PDZRN4Q6ZMN7 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC19.33■□□□□ 0.68
PDZRN4Q6ZMN7 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
PDZRN4Q6ZMN7 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PDZRN4Q6ZMN7 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
PDZRN4Q6ZMN7 AC100803.2-201ENST00000562459 1963 ntBASIC19.33■□□□□ 0.68
PDZRN4Q6ZMN7 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.33■□□□□ 0.68
PDZRN4Q6ZMN7 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PDZRN4Q6ZMN7 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PDZRN4Q6ZMN7 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
PDZRN4Q6ZMN7 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDZRN4Q6ZMN7 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.32■□□□□ 0.68
PDZRN4Q6ZMN7 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDZRN4Q6ZMN7 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDZRN4Q6ZMN7 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC19.32■□□□□ 0.68
PDZRN4Q6ZMN7 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDZRN4Q6ZMN7 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDZRN4Q6ZMN7 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDZRN4Q6ZMN7 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDZRN4Q6ZMN7 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDZRN4Q6ZMN7 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
PDZRN4Q6ZMN7 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDZRN4Q6ZMN7 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.32■□□□□ 0.68
PDZRN4Q6ZMN7 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDZRN4Q6ZMN7 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.32■□□□□ 0.68
PDZRN4Q6ZMN7 AC106795.1-205ENST00000512851 1056 ntBASIC19.32■□□□□ 0.68
PDZRN4Q6ZMN7 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.32■□□□□ 0.68
PDZRN4Q6ZMN7 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
PDZRN4Q6ZMN7 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.32■□□□□ 0.68
PDZRN4Q6ZMN7 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.32■□□□□ 0.68
PDZRN4Q6ZMN7 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDZRN4Q6ZMN7 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDZRN4Q6ZMN7 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDZRN4Q6ZMN7 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDZRN4Q6ZMN7 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PDZRN4Q6ZMN7 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDZRN4Q6ZMN7 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDZRN4Q6ZMN7 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PDZRN4Q6ZMN7 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDZRN4Q6ZMN7 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDZRN4Q6ZMN7 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDZRN4Q6ZMN7 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PDZRN4Q6ZMN7 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDZRN4Q6ZMN7 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDZRN4Q6ZMN7 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDZRN4Q6ZMN7 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PDZRN4Q6ZMN7 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC19.32■□□□□ 0.68
PDZRN4Q6ZMN7 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms