Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.53■□□□□ 0.4
FOXR1Q6PIV2 REXO1L6P-202ENST00000619970 1078 ntBASIC17.53■□□□□ 0.4
FOXR1Q6PIV2 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.53■□□□□ 0.4
FOXR1Q6PIV2 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.53■□□□□ 0.4
FOXR1Q6PIV2 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.53■□□□□ 0.4
FOXR1Q6PIV2 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
FOXR1Q6PIV2 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FOXR1Q6PIV2 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
FOXR1Q6PIV2 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
FOXR1Q6PIV2 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.53■□□□□ 0.4
FOXR1Q6PIV2 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FOXR1Q6PIV2 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
FOXR1Q6PIV2 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
FOXR1Q6PIV2 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FOXR1Q6PIV2 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
FOXR1Q6PIV2 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.53■□□□□ 0.4
FOXR1Q6PIV2 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FOXR1Q6PIV2 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
FOXR1Q6PIV2 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
FOXR1Q6PIV2 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
FOXR1Q6PIV2 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
FOXR1Q6PIV2 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.52■□□□□ 0.4
FOXR1Q6PIV2 AL163051.1-201ENST00000569214 1512 ntBASIC17.52■□□□□ 0.4
FOXR1Q6PIV2 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
FOXR1Q6PIV2 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
FOXR1Q6PIV2 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
FOXR1Q6PIV2 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
FOXR1Q6PIV2 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
FOXR1Q6PIV2 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
FOXR1Q6PIV2 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
FOXR1Q6PIV2 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
FOXR1Q6PIV2 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
FOXR1Q6PIV2 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
FOXR1Q6PIV2 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.52■□□□□ 0.4
FOXR1Q6PIV2 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
FOXR1Q6PIV2 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
FOXR1Q6PIV2 FAM197Y8-203ENST00000450145 560 ntBASIC17.52■□□□□ 0.4
FOXR1Q6PIV2 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
FOXR1Q6PIV2 RN7SL606P-201ENST00000472779 293 ntBASIC17.52■□□□□ 0.4
FOXR1Q6PIV2 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.52■□□□□ 0.4
FOXR1Q6PIV2 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.52■□□□□ 0.4
FOXR1Q6PIV2 MIR3180-4-201ENST00000582223 153 ntBASIC17.52■□□□□ 0.4
FOXR1Q6PIV2 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.52■□□□□ 0.4
FOXR1Q6PIV2 BX640515.1-201ENST00000617215 977 ntBASIC17.52■□□□□ 0.4
FOXR1Q6PIV2 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
FOXR1Q6PIV2 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC17.52■□□□□ 0.4
FOXR1Q6PIV2 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.52■□□□□ 0.4
FOXR1Q6PIV2 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.52■□□□□ 0.4
FOXR1Q6PIV2 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
FOXR1Q6PIV2 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
FOXR1Q6PIV2 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC17.52■□□□□ 0.4
FOXR1Q6PIV2 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
FOXR1Q6PIV2 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
FOXR1Q6PIV2 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
FOXR1Q6PIV2 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
FOXR1Q6PIV2 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
FOXR1Q6PIV2 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.39
FOXR1Q6PIV2 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
FOXR1Q6PIV2 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
FOXR1Q6PIV2 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
FOXR1Q6PIV2 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
FOXR1Q6PIV2 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
FOXR1Q6PIV2 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
FOXR1Q6PIV2 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FOXR1Q6PIV2 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FOXR1Q6PIV2 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
FOXR1Q6PIV2 AC138035.3-201ENST00000622706 2791 ntBASIC17.51■□□□□ 0.39
FOXR1Q6PIV2 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FOXR1Q6PIV2 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FOXR1Q6PIV2 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
FOXR1Q6PIV2 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
FOXR1Q6PIV2 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FOXR1Q6PIV2 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.51■□□□□ 0.39
FOXR1Q6PIV2 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
FOXR1Q6PIV2 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FOXR1Q6PIV2 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
FOXR1Q6PIV2 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
FOXR1Q6PIV2 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.51■□□□□ 0.39
FOXR1Q6PIV2 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.51■□□□□ 0.39
FOXR1Q6PIV2 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.51■□□□□ 0.39
FOXR1Q6PIV2 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
FOXR1Q6PIV2 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.51■□□□□ 0.39
FOXR1Q6PIV2 AC096582.2-201ENST00000510860 516 ntBASIC17.51■□□□□ 0.39
FOXR1Q6PIV2 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.51■□□□□ 0.39
FOXR1Q6PIV2 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.51■□□□□ 0.39
FOXR1Q6PIV2 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.51■□□□□ 0.39
FOXR1Q6PIV2 AL591684.3-201ENST00000605187 298 ntBASIC17.51■□□□□ 0.39
FOXR1Q6PIV2 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.51■□□□□ 0.39
FOXR1Q6PIV2 TP73-AS1-207ENST00000624167 988 ntBASIC17.51■□□□□ 0.39
FOXR1Q6PIV2 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.51■□□□□ 0.39
FOXR1Q6PIV2 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.51■□□□□ 0.39
FOXR1Q6PIV2 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
FOXR1Q6PIV2 AC009949.1-201ENST00000623048 1830 ntBASIC17.51■□□□□ 0.39
FOXR1Q6PIV2 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FOXR1Q6PIV2 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
FOXR1Q6PIV2 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
FOXR1Q6PIV2 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.51■□□□□ 0.39
FOXR1Q6PIV2 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
FOXR1Q6PIV2 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FOXR1Q6PIV2 IL9RP2-201ENST00000423948 1312 ntBASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms