Protein–RNA interactions for Protein: Q6PCB7

SLC27A1, Long-chain fatty acid transport protein 1, humanhuman

Predictions only

Length 646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1Q6PCB7 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC27A1Q6PCB7 MIR770-201ENST00000390219 98 ntBASIC18.03■□□□□ 0.48
SLC27A1Q6PCB7 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
SLC27A1Q6PCB7 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SLC27A1Q6PCB7 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SLC27A1Q6PCB7 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.03■□□□□ 0.48
SLC27A1Q6PCB7 AC051619.7-201ENST00000568314 623 ntBASIC18.03■□□□□ 0.48
SLC27A1Q6PCB7 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC18.03■□□□□ 0.48
SLC27A1Q6PCB7 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC18.03■□□□□ 0.48
SLC27A1Q6PCB7 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC27A1Q6PCB7 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.03■□□□□ 0.48
SLC27A1Q6PCB7 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.03■□□□□ 0.48
SLC27A1Q6PCB7 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC27A1Q6PCB7 AC073439.1-201ENST00000624121 1774 ntBASIC18.03■□□□□ 0.48
SLC27A1Q6PCB7 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.03■□□□□ 0.48
SLC27A1Q6PCB7 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SLC27A1Q6PCB7 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SLC27A1Q6PCB7 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC27A1Q6PCB7 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC27A1Q6PCB7 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC27A1Q6PCB7 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
SLC27A1Q6PCB7 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.02■□□□□ 0.48
SLC27A1Q6PCB7 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC27A1Q6PCB7 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.02■□□□□ 0.48
SLC27A1Q6PCB7 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SLC27A1Q6PCB7 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
SLC27A1Q6PCB7 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC27A1Q6PCB7 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC27A1Q6PCB7 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SLC27A1Q6PCB7 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SLC27A1Q6PCB7 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC18.02■□□□□ 0.48
SLC27A1Q6PCB7 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC27A1Q6PCB7 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC27A1Q6PCB7 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC18.02■□□□□ 0.48
SLC27A1Q6PCB7 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.02■□□□□ 0.48
SLC27A1Q6PCB7 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC18.02■□□□□ 0.48
SLC27A1Q6PCB7 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC27A1Q6PCB7 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.02■□□□□ 0.48
SLC27A1Q6PCB7 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
SLC27A1Q6PCB7 AC005915.1-201ENST00000624912 2018 ntBASIC18.02■□□□□ 0.48
SLC27A1Q6PCB7 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
SLC27A1Q6PCB7 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC27A1Q6PCB7 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC27A1Q6PCB7 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
SLC27A1Q6PCB7 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
SLC27A1Q6PCB7 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SLC27A1Q6PCB7 AC105020.1-201ENST00000435356 2205 ntBASIC18.02■□□□□ 0.47
SLC27A1Q6PCB7 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
SLC27A1Q6PCB7 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SLC27A1Q6PCB7 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SLC27A1Q6PCB7 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.02■□□□□ 0.47
SLC27A1Q6PCB7 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC27A1Q6PCB7 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.01■□□□□ 0.47
SLC27A1Q6PCB7 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.01■□□□□ 0.47
SLC27A1Q6PCB7 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
SLC27A1Q6PCB7 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.01■□□□□ 0.47
SLC27A1Q6PCB7 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
SLC27A1Q6PCB7 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC27A1Q6PCB7 AC008677.1-201ENST00000519230 1561 ntBASIC18.01■□□□□ 0.47
SLC27A1Q6PCB7 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
SLC27A1Q6PCB7 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC27A1Q6PCB7 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SLC27A1Q6PCB7 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
SLC27A1Q6PCB7 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.01■□□□□ 0.47
SLC27A1Q6PCB7 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.01■□□□□ 0.47
SLC27A1Q6PCB7 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC18.01■□□□□ 0.47
SLC27A1Q6PCB7 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC18.01■□□□□ 0.47
SLC27A1Q6PCB7 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.01■□□□□ 0.47
SLC27A1Q6PCB7 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.01■□□□□ 0.47
SLC27A1Q6PCB7 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.01■□□□□ 0.47
SLC27A1Q6PCB7 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
SLC27A1Q6PCB7 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.01■□□□□ 0.47
SLC27A1Q6PCB7 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.01■□□□□ 0.47
SLC27A1Q6PCB7 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.01■□□□□ 0.47
SLC27A1Q6PCB7 AL603756.1-201ENST00000606511 2163 ntBASIC18.01■□□□□ 0.47
SLC27A1Q6PCB7 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC27A1Q6PCB7 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC27A1Q6PCB7 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SLC27A1Q6PCB7 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
SLC27A1Q6PCB7 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC27A1Q6PCB7 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC27A1Q6PCB7 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
SLC27A1Q6PCB7 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC27A1Q6PCB7 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.01■□□□□ 0.47
SLC27A1Q6PCB7 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC27A1Q6PCB7 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.01■□□□□ 0.47
SLC27A1Q6PCB7 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18■□□□□ 0.47
SLC27A1Q6PCB7 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
SLC27A1Q6PCB7 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18■□□□□ 0.47
SLC27A1Q6PCB7 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
SLC27A1Q6PCB7 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
SLC27A1Q6PCB7 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC27A1Q6PCB7 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC27A1Q6PCB7 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC27A1Q6PCB7 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC27A1Q6PCB7 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18■□□□□ 0.47
SLC27A1Q6PCB7 FOXO1B-201ENST00000504678 1527 ntBASIC18■□□□□ 0.47
SLC27A1Q6PCB7 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18■□□□□ 0.47
SLC27A1Q6PCB7 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
SLC27A1Q6PCB7 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms