Protein–RNA interactions for Protein: Q6IMN6

CAPRIN2, Caprin-2, humanhuman

Known RBP Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN2Q6IMN6 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CAPRIN2Q6IMN6 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CAPRIN2Q6IMN6 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CAPRIN2Q6IMN6 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
CAPRIN2Q6IMN6 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.08■□□□□ 0.33
CAPRIN2Q6IMN6 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.08■□□□□ 0.32
CAPRIN2Q6IMN6 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
CAPRIN2Q6IMN6 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CAPRIN2Q6IMN6 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CAPRIN2Q6IMN6 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.08■□□□□ 0.32
CAPRIN2Q6IMN6 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.08■□□□□ 0.32
CAPRIN2Q6IMN6 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CAPRIN2Q6IMN6 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.08■□□□□ 0.32
CAPRIN2Q6IMN6 KLF4P1-201ENST00000412782 1185 ntBASIC17.08■□□□□ 0.32
CAPRIN2Q6IMN6 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.08■□□□□ 0.32
CAPRIN2Q6IMN6 AL020989.1-201ENST00000422979 469 ntBASIC17.08■□□□□ 0.32
CAPRIN2Q6IMN6 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.08■□□□□ 0.32
CAPRIN2Q6IMN6 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.08■□□□□ 0.32
CAPRIN2Q6IMN6 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CAPRIN2Q6IMN6 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CAPRIN2Q6IMN6 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.08■□□□□ 0.32
CAPRIN2Q6IMN6 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CAPRIN2Q6IMN6 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CAPRIN2Q6IMN6 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CAPRIN2Q6IMN6 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
CAPRIN2Q6IMN6 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CAPRIN2Q6IMN6 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CAPRIN2Q6IMN6 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CAPRIN2Q6IMN6 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CAPRIN2Q6IMN6 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CAPRIN2Q6IMN6 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.07■□□□□ 0.32
CAPRIN2Q6IMN6 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CAPRIN2Q6IMN6 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.07■□□□□ 0.32
CAPRIN2Q6IMN6 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.07■□□□□ 0.32
CAPRIN2Q6IMN6 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CAPRIN2Q6IMN6 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CAPRIN2Q6IMN6 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
CAPRIN2Q6IMN6 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CAPRIN2Q6IMN6 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.07■□□□□ 0.32
CAPRIN2Q6IMN6 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CAPRIN2Q6IMN6 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CAPRIN2Q6IMN6 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CAPRIN2Q6IMN6 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC17.07■□□□□ 0.32
CAPRIN2Q6IMN6 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CAPRIN2Q6IMN6 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.07■□□□□ 0.32
CAPRIN2Q6IMN6 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CAPRIN2Q6IMN6 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CAPRIN2Q6IMN6 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CAPRIN2Q6IMN6 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CAPRIN2Q6IMN6 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CAPRIN2Q6IMN6 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CAPRIN2Q6IMN6 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.07■□□□□ 0.32
CAPRIN2Q6IMN6 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.07■□□□□ 0.32
CAPRIN2Q6IMN6 RNPS1P1-201ENST00000507437 918 ntBASIC17.07■□□□□ 0.32
CAPRIN2Q6IMN6 STK19B-204ENST00000512515 211 ntBASIC17.07■□□□□ 0.32
CAPRIN2Q6IMN6 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.07■□□□□ 0.32
CAPRIN2Q6IMN6 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.07■□□□□ 0.32
CAPRIN2Q6IMN6 AC021087.4-201ENST00000563761 564 ntBASIC17.07■□□□□ 0.32
CAPRIN2Q6IMN6 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.07■□□□□ 0.32
CAPRIN2Q6IMN6 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CAPRIN2Q6IMN6 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.07■□□□□ 0.32
CAPRIN2Q6IMN6 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CAPRIN2Q6IMN6 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CAPRIN2Q6IMN6 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.07■□□□□ 0.32
CAPRIN2Q6IMN6 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CAPRIN2Q6IMN6 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CAPRIN2Q6IMN6 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CAPRIN2Q6IMN6 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CAPRIN2Q6IMN6 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CAPRIN2Q6IMN6 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CAPRIN2Q6IMN6 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CAPRIN2Q6IMN6 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CAPRIN2Q6IMN6 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CAPRIN2Q6IMN6 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.07■□□□□ 0.32
CAPRIN2Q6IMN6 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC17.07■□□□□ 0.32
CAPRIN2Q6IMN6 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CAPRIN2Q6IMN6 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CAPRIN2Q6IMN6 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.07■□□□□ 0.32
CAPRIN2Q6IMN6 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.07■□□□□ 0.32
CAPRIN2Q6IMN6 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CAPRIN2Q6IMN6 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CAPRIN2Q6IMN6 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
CAPRIN2Q6IMN6 AC009336.1-201ENST00000608941 1553 ntBASIC17.06■□□□□ 0.32
CAPRIN2Q6IMN6 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CAPRIN2Q6IMN6 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.06■□□□□ 0.32
CAPRIN2Q6IMN6 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CAPRIN2Q6IMN6 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CAPRIN2Q6IMN6 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CAPRIN2Q6IMN6 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.06■□□□□ 0.32
CAPRIN2Q6IMN6 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CAPRIN2Q6IMN6 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CAPRIN2Q6IMN6 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CAPRIN2Q6IMN6 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CAPRIN2Q6IMN6 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CAPRIN2Q6IMN6 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CAPRIN2Q6IMN6 MRPL3P1-201ENST00000400109 1033 ntBASIC17.06■□□□□ 0.32
CAPRIN2Q6IMN6 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.06■□□□□ 0.32
CAPRIN2Q6IMN6 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.06■□□□□ 0.32
CAPRIN2Q6IMN6 KRT18P67-201ENST00000432816 1264 ntBASIC17.06■□□□□ 0.32
CAPRIN2Q6IMN6 BX005266.1-201ENST00000473402 457 ntBASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms