Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF43Q68DV7 PCDHB17P-201ENST00000539533 2393 ntBASIC17.58■□□□□ 0.41
RNF43Q68DV7 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.58■□□□□ 0.41
RNF43Q68DV7 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF43Q68DV7 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.58■□□□□ 0.4
RNF43Q68DV7 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF43Q68DV7 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RNF43Q68DV7 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF43Q68DV7 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF43Q68DV7 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF43Q68DV7 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RNF43Q68DV7 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
RNF43Q68DV7 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.4
RNF43Q68DV7 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
RNF43Q68DV7 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RNF43Q68DV7 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
RNF43Q68DV7 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.58■□□□□ 0.4
RNF43Q68DV7 AC087163.2-201ENST00000457299 853 ntBASIC17.58■□□□□ 0.4
RNF43Q68DV7 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF43Q68DV7 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.58■□□□□ 0.4
RNF43Q68DV7 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF43Q68DV7 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF43Q68DV7 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF43Q68DV7 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
RNF43Q68DV7 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
RNF43Q68DV7 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF43Q68DV7 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.58■□□□□ 0.4
RNF43Q68DV7 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF43Q68DV7 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RNF43Q68DV7 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF43Q68DV7 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.58■□□□□ 0.4
RNF43Q68DV7 AC116353.5-201ENST00000638148 1699 ntBASIC17.58■□□□□ 0.4
RNF43Q68DV7 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.58■□□□□ 0.4
RNF43Q68DV7 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF43Q68DV7 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.58■□□□□ 0.4
RNF43Q68DV7 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF43Q68DV7 MST1L-201ENST00000442552 2185 ntBASIC17.57■□□□□ 0.4
RNF43Q68DV7 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.57■□□□□ 0.4
RNF43Q68DV7 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RNF43Q68DV7 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNF43Q68DV7 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
RNF43Q68DV7 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RNF43Q68DV7 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
RNF43Q68DV7 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RNF43Q68DV7 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF43Q68DV7 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.57■□□□□ 0.4
RNF43Q68DV7 FAM185BP-201ENST00000443595 716 ntBASIC17.57■□□□□ 0.4
RNF43Q68DV7 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
RNF43Q68DV7 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNF43Q68DV7 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF43Q68DV7 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
RNF43Q68DV7 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.57■□□□□ 0.4
RNF43Q68DV7 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF43Q68DV7 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF43Q68DV7 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF43Q68DV7 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF43Q68DV7 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.56■□□□□ 0.4
RNF43Q68DV7 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.56■□□□□ 0.4
RNF43Q68DV7 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF43Q68DV7 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF43Q68DV7 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF43Q68DV7 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF43Q68DV7 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.56■□□□□ 0.4
RNF43Q68DV7 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.56■□□□□ 0.4
RNF43Q68DV7 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RNF43Q68DV7 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF43Q68DV7 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF43Q68DV7 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
RNF43Q68DV7 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF43Q68DV7 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF43Q68DV7 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF43Q68DV7 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
RNF43Q68DV7 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.56■□□□□ 0.4
RNF43Q68DV7 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.56■□□□□ 0.4
RNF43Q68DV7 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF43Q68DV7 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.56■□□□□ 0.4
RNF43Q68DV7 AC107918.2-201ENST00000530817 355 ntBASIC17.56■□□□□ 0.4
RNF43Q68DV7 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
RNF43Q68DV7 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.56■□□□□ 0.4
RNF43Q68DV7 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.56■□□□□ 0.4
RNF43Q68DV7 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.56■□□□□ 0.4
RNF43Q68DV7 ACTL9-202ENST00000612068 1252 ntBASIC17.56■□□□□ 0.4
RNF43Q68DV7 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.56■□□□□ 0.4
RNF43Q68DV7 AC092865.6-201ENST00000642101 219 ntBASIC17.56■□□□□ 0.4
RNF43Q68DV7 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF43Q68DV7 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.56■□□□□ 0.4
RNF43Q68DV7 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.56■□□□□ 0.4
RNF43Q68DV7 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF43Q68DV7 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RNF43Q68DV7 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.55■□□□□ 0.4
RNF43Q68DV7 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
RNF43Q68DV7 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.55■□□□□ 0.4
RNF43Q68DV7 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RNF43Q68DV7 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.55■□□□□ 0.4
RNF43Q68DV7 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
RNF43Q68DV7 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF43Q68DV7 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF43Q68DV7 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF43Q68DV7 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
RNF43Q68DV7 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms