Protein–RNA interactions for Protein: Q4G0U5

CFAP221, Cilia- and flagella-associated protein 221, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP221Q4G0U5 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CFAP221Q4G0U5 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CFAP221Q4G0U5 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CFAP221Q4G0U5 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CFAP221Q4G0U5 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CFAP221Q4G0U5 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.28■□□□□ 0.52
CFAP221Q4G0U5 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.28■□□□□ 0.52
CFAP221Q4G0U5 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CFAP221Q4G0U5 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CFAP221Q4G0U5 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CFAP221Q4G0U5 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CFAP221Q4G0U5 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CFAP221Q4G0U5 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CFAP221Q4G0U5 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CFAP221Q4G0U5 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CFAP221Q4G0U5 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.28■□□□□ 0.52
CFAP221Q4G0U5 KRT18P3-201ENST00000451602 1288 ntBASIC18.28■□□□□ 0.52
CFAP221Q4G0U5 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.28■□□□□ 0.52
CFAP221Q4G0U5 AC108073.2-201ENST00000464002 357 ntBASIC18.28■□□□□ 0.52
CFAP221Q4G0U5 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.28■□□□□ 0.52
CFAP221Q4G0U5 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.28■□□□□ 0.52
CFAP221Q4G0U5 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.28■□□□□ 0.52
CFAP221Q4G0U5 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.28■□□□□ 0.52
CFAP221Q4G0U5 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.28■□□□□ 0.52
CFAP221Q4G0U5 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.28■□□□□ 0.52
CFAP221Q4G0U5 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.28■□□□□ 0.52
CFAP221Q4G0U5 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.28■□□□□ 0.52
CFAP221Q4G0U5 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.28■□□□□ 0.52
CFAP221Q4G0U5 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CFAP221Q4G0U5 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC18.28■□□□□ 0.52
CFAP221Q4G0U5 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CFAP221Q4G0U5 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CFAP221Q4G0U5 AC008741.2-201ENST00000612792 3115 ntBASIC18.28■□□□□ 0.52
CFAP221Q4G0U5 AC092068.3-201ENST00000587894 2016 ntBASIC18.28■□□□□ 0.52
CFAP221Q4G0U5 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC18.28■□□□□ 0.52
CFAP221Q4G0U5 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC18.28■□□□□ 0.52
CFAP221Q4G0U5 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.28■□□□□ 0.52
CFAP221Q4G0U5 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CFAP221Q4G0U5 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CFAP221Q4G0U5 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CFAP221Q4G0U5 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CFAP221Q4G0U5 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CFAP221Q4G0U5 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.28■□□□□ 0.52
CFAP221Q4G0U5 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CFAP221Q4G0U5 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CFAP221Q4G0U5 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CFAP221Q4G0U5 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CFAP221Q4G0U5 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CFAP221Q4G0U5 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CFAP221Q4G0U5 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC18.27■□□□□ 0.52
CFAP221Q4G0U5 AL590787.1-201ENST00000568856 1315 ntBASIC18.27■□□□□ 0.52
CFAP221Q4G0U5 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.27■□□□□ 0.52
CFAP221Q4G0U5 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CFAP221Q4G0U5 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CFAP221Q4G0U5 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.27■□□□□ 0.52
CFAP221Q4G0U5 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC18.27■□□□□ 0.52
CFAP221Q4G0U5 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.27■□□□□ 0.52
CFAP221Q4G0U5 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CFAP221Q4G0U5 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CFAP221Q4G0U5 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
CFAP221Q4G0U5 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CFAP221Q4G0U5 MIR940-201ENST00000401276 94 ntBASIC18.27■□□□□ 0.52
CFAP221Q4G0U5 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.27■□□□□ 0.52
CFAP221Q4G0U5 PRSS29P-201ENST00000440800 595 ntBASIC18.27■□□□□ 0.52
CFAP221Q4G0U5 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
CFAP221Q4G0U5 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.27■□□□□ 0.52
CFAP221Q4G0U5 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.27■□□□□ 0.52
CFAP221Q4G0U5 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.27■□□□□ 0.52
CFAP221Q4G0U5 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CFAP221Q4G0U5 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CFAP221Q4G0U5 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.27■□□□□ 0.52
CFAP221Q4G0U5 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CFAP221Q4G0U5 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC18.27■□□□□ 0.52
CFAP221Q4G0U5 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.27■□□□□ 0.51
CFAP221Q4G0U5 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.27■□□□□ 0.51
CFAP221Q4G0U5 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CFAP221Q4G0U5 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CFAP221Q4G0U5 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
CFAP221Q4G0U5 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.27■□□□□ 0.51
CFAP221Q4G0U5 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC18.27■□□□□ 0.51
CFAP221Q4G0U5 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CFAP221Q4G0U5 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CFAP221Q4G0U5 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CFAP221Q4G0U5 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CFAP221Q4G0U5 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CFAP221Q4G0U5 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.26■□□□□ 0.51
CFAP221Q4G0U5 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
CFAP221Q4G0U5 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CFAP221Q4G0U5 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CFAP221Q4G0U5 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CFAP221Q4G0U5 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
CFAP221Q4G0U5 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CFAP221Q4G0U5 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CFAP221Q4G0U5 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CFAP221Q4G0U5 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CFAP221Q4G0U5 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CFAP221Q4G0U5 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.26■□□□□ 0.51
CFAP221Q4G0U5 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.26■□□□□ 0.51
CFAP221Q4G0U5 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.26■□□□□ 0.51
CFAP221Q4G0U5 RNA5SP416-201ENST00000516838 111 ntBASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms