Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.69■□□□□ 0.58
ASIC1P78348 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ASIC1P78348 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.69■□□□□ 0.58
ASIC1P78348 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
ASIC1P78348 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ASIC1P78348 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ASIC1P78348 TPM4P1-201ENST00000436100 807 ntBASIC18.69■□□□□ 0.58
ASIC1P78348 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
ASIC1P78348 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.69■□□□□ 0.58
ASIC1P78348 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ASIC1P78348 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.69■□□□□ 0.58
ASIC1P78348 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.69■□□□□ 0.58
ASIC1P78348 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.69■□□□□ 0.58
ASIC1P78348 AC005412.3-201ENST00000580309 715 ntBASIC18.69■□□□□ 0.58
ASIC1P78348 CYP2A7P1-201ENST00000595391 815 ntBASIC18.69■□□□□ 0.58
ASIC1P78348 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.69■□□□□ 0.58
ASIC1P78348 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
ASIC1P78348 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ASIC1P78348 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ASIC1P78348 TNRC18P3-201ENST00000441896 2691 ntBASIC18.69■□□□□ 0.58
ASIC1P78348 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ASIC1P78348 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.69■□□□□ 0.58
ASIC1P78348 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ASIC1P78348 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.69■□□□□ 0.58
ASIC1P78348 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ASIC1P78348 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ASIC1P78348 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ASIC1P78348 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ASIC1P78348 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ASIC1P78348 PCDH8P1-201ENST00000428983 2773 ntBASIC18.69■□□□□ 0.58
ASIC1P78348 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
ASIC1P78348 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ASIC1P78348 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ASIC1P78348 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ASIC1P78348 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ASIC1P78348 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ASIC1P78348 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ASIC1P78348 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ASIC1P78348 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC18.68■□□□□ 0.58
ASIC1P78348 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC18.68■□□□□ 0.58
ASIC1P78348 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ASIC1P78348 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ASIC1P78348 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.68■□□□□ 0.58
ASIC1P78348 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ASIC1P78348 AC009078.2-202ENST00000463353 338 ntBASIC18.68■□□□□ 0.58
ASIC1P78348 AC108751.1-201ENST00000490852 363 ntBASIC18.68■□□□□ 0.58
ASIC1P78348 RNA5SP419-201ENST00000515908 135 ntBASIC18.68■□□□□ 0.58
ASIC1P78348 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.68■□□□□ 0.58
ASIC1P78348 AP001005.1-201ENST00000571755 1248 ntBASIC18.68■□□□□ 0.58
ASIC1P78348 OR7E47P-204ENST00000575924 449 ntBASIC18.68■□□□□ 0.58
ASIC1P78348 MIR4751-201ENST00000578027 74 ntBASIC18.68■□□□□ 0.58
ASIC1P78348 SLC25A6P4-201ENST00000586535 553 ntBASIC18.68■□□□□ 0.58
ASIC1P78348 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.68■□□□□ 0.58
ASIC1P78348 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ASIC1P78348 AC116407.3-201ENST00000623905 1129 ntBASIC18.68■□□□□ 0.58
ASIC1P78348 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ASIC1P78348 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.68■□□□□ 0.58
ASIC1P78348 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
ASIC1P78348 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18.68■□□□□ 0.58
ASIC1P78348 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
ASIC1P78348 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
ASIC1P78348 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
ASIC1P78348 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ASIC1P78348 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
ASIC1P78348 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
ASIC1P78348 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ASIC1P78348 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ASIC1P78348 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ASIC1P78348 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.68■□□□□ 0.58
ASIC1P78348 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ASIC1P78348 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ASIC1P78348 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
ASIC1P78348 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.68■□□□□ 0.58
ASIC1P78348 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.68■□□□□ 0.58
ASIC1P78348 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC18.68■□□□□ 0.58
ASIC1P78348 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ASIC1P78348 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ASIC1P78348 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ASIC1P78348 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ASIC1P78348 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ASIC1P78348 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.67■□□□□ 0.58
ASIC1P78348 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ASIC1P78348 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ASIC1P78348 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ASIC1P78348 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ASIC1P78348 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ASIC1P78348 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ASIC1P78348 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
ASIC1P78348 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ASIC1P78348 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ASIC1P78348 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
ASIC1P78348 AC093909.1-201ENST00000504731 1122 ntBASIC18.67■□□□□ 0.58
ASIC1P78348 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.67■□□□□ 0.58
ASIC1P78348 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.67■□□□□ 0.58
ASIC1P78348 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
ASIC1P78348 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
ASIC1P78348 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.67■□□□□ 0.58
ASIC1P78348 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.67■□□□□ 0.58
ASIC1P78348 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
ASIC1P78348 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms