Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAB5BP61020 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAB5BP61020 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RAB5BP61020 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC13.12□□□□□ -0.31
RAB5BP61020 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RAB5BP61020 AC142381.2-201ENST00000566120 298 ntBASIC13.12□□□□□ -0.31
RAB5BP61020 PLLP-204ENST00000569059 665 ntTSL 3 BASIC13.12□□□□□ -0.31
RAB5BP61020 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RAB5BP61020 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RAB5BP61020 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
RAB5BP61020 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
RAB5BP61020 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RAB5BP61020 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC13.12□□□□□ -0.31
RAB5BP61020 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAB5BP61020 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
RAB5BP61020 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAB5BP61020 LINC01311-201ENST00000565162 1445 ntBASIC13.12□□□□□ -0.31
RAB5BP61020 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC13.12□□□□□ -0.31
RAB5BP61020 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAB5BP61020 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
RAB5BP61020 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.12□□□□□ -0.31
RAB5BP61020 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAB5BP61020 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAB5BP61020 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAB5BP61020 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAB5BP61020 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAB5BP61020 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAB5BP61020 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RAB5BP61020 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
RAB5BP61020 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RAB5BP61020 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB5BP61020 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
RAB5BP61020 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC13.11□□□□□ -0.31
RAB5BP61020 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
RAB5BP61020 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.11□□□□□ -0.31
RAB5BP61020 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB5BP61020 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB5BP61020 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC13.11□□□□□ -0.31
RAB5BP61020 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RAB5BP61020 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB5BP61020 AC006504.5-208ENST00000588784 2401 ntBASIC13.11□□□□□ -0.31
RAB5BP61020 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB5BP61020 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB5BP61020 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC13.11□□□□□ -0.31
RAB5BP61020 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC13.11□□□□□ -0.31
RAB5BP61020 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB5BP61020 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RAB5BP61020 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB5BP61020 AL391256.1-201ENST00000443260 1855 ntBASIC13.11□□□□□ -0.31
RAB5BP61020 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.11□□□□□ -0.31
RAB5BP61020 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB5BP61020 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB5BP61020 GPX1P1-201ENST00000388829 606 ntBASIC13.11□□□□□ -0.31
RAB5BP61020 UQCRFS1P1-201ENST00000435169 820 ntBASIC13.11□□□□□ -0.31
RAB5BP61020 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB5BP61020 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC13.11□□□□□ -0.31
RAB5BP61020 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB5BP61020 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RAB5BP61020 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RAB5BP61020 AL031432.3-201ENST00000607698 485 ntBASIC13.11□□□□□ -0.31
RAB5BP61020 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC13.11□□□□□ -0.31
RAB5BP61020 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
RAB5BP61020 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.11□□□□□ -0.31
RAB5BP61020 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB5BP61020 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RAB5BP61020 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB5BP61020 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
RAB5BP61020 SDHAP2-201ENST00000455183 2001 ntBASIC13.11□□□□□ -0.31
RAB5BP61020 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
RAB5BP61020 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RAB5BP61020 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.11□□□□□ -0.31
RAB5BP61020 COL6A4P2-202ENST00000504443 2753 ntBASIC13.11□□□□□ -0.31
RAB5BP61020 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB5BP61020 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RAB5BP61020 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB5BP61020 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RAB5BP61020 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB5BP61020 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB5BP61020 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
RAB5BP61020 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
RAB5BP61020 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC13.11□□□□□ -0.31
RAB5BP61020 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB5BP61020 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RAB5BP61020 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
RAB5BP61020 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.1□□□□□ -0.31
RAB5BP61020 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC13.1□□□□□ -0.31
RAB5BP61020 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.1□□□□□ -0.31
RAB5BP61020 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RAB5BP61020 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RAB5BP61020 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC13.1□□□□□ -0.31
RAB5BP61020 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RAB5BP61020 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
RAB5BP61020 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RAB5BP61020 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.1□□□□□ -0.31
RAB5BP61020 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RAB5BP61020 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
RAB5BP61020 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
RAB5BP61020 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RAB5BP61020 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC13.1□□□□□ -0.31
RAB5BP61020 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms