Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ACTBP60709 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.45□□□□□ -0.1
ACTBP60709 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.45□□□□□ -0.1
ACTBP60709 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ACTBP60709 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
ACTBP60709 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.45□□□□□ -0.1
ACTBP60709 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.45□□□□□ -0.1
ACTBP60709 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ACTBP60709 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ACTBP60709 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ACTBP60709 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ACTBP60709 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.45□□□□□ -0.1
ACTBP60709 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
ACTBP60709 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
ACTBP60709 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ACTBP60709 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ACTBP60709 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ACTBP60709 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ACTBP60709 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ACTBP60709 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ACTBP60709 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC14.45□□□□□ -0.1
ACTBP60709 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ACTBP60709 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.45□□□□□ -0.1
ACTBP60709 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC14.45□□□□□ -0.1
ACTBP60709 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
ACTBP60709 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC14.45□□□□□ -0.1
ACTBP60709 DAP-202ENST00000432074 1048 ntTSL 2 BASIC14.45□□□□□ -0.1
ACTBP60709 AC103564.2-201ENST00000432853 1299 ntBASIC14.45□□□□□ -0.1
ACTBP60709 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.45□□□□□ -0.1
ACTBP60709 GPR32P1-201ENST00000601788 811 ntBASIC14.45□□□□□ -0.1
ACTBP60709 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ACTBP60709 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ACTBP60709 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.45□□□□□ -0.1
ACTBP60709 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ACTBP60709 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.45□□□□□ -0.1
ACTBP60709 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ACTBP60709 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ACTBP60709 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
ACTBP60709 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ACTBP60709 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
ACTBP60709 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
ACTBP60709 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.45□□□□□ -0.1
ACTBP60709 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ACTBP60709 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.45□□□□□ -0.1
ACTBP60709 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ACTBP60709 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ACTBP60709 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ACTBP60709 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ACTBP60709 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
ACTBP60709 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.44□□□□□ -0.1
ACTBP60709 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ACTBP60709 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.44□□□□□ -0.1
ACTBP60709 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ACTBP60709 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
ACTBP60709 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ACTBP60709 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ACTBP60709 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ACTBP60709 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
ACTBP60709 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ACTBP60709 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ACTBP60709 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ACTBP60709 AL645929.1-201ENST00000420084 975 ntBASIC14.44□□□□□ -0.1
ACTBP60709 AC007967.3-201ENST00000434308 558 ntBASIC14.44□□□□□ -0.1
ACTBP60709 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC14.44□□□□□ -0.1
ACTBP60709 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
ACTBP60709 AC122714.2-201ENST00000502787 707 ntBASIC14.44□□□□□ -0.1
ACTBP60709 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC14.44□□□□□ -0.1
ACTBP60709 STK25P1-201ENST00000585406 838 ntBASIC14.44□□□□□ -0.1
ACTBP60709 AC005332.3-201ENST00000589904 676 ntBASIC14.44□□□□□ -0.1
ACTBP60709 NTF6B-201ENST00000591913 560 ntBASIC14.44□□□□□ -0.1
ACTBP60709 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ACTBP60709 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC14.44□□□□□ -0.1
ACTBP60709 AL590326.2-201ENST00000625139 305 ntBASIC14.44□□□□□ -0.1
ACTBP60709 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ACTBP60709 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
ACTBP60709 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ACTBP60709 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ACTBP60709 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ACTBP60709 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ACTBP60709 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ACTBP60709 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ACTBP60709 LINC00895-201ENST00000629028 1637 ntBASIC14.44□□□□□ -0.1
ACTBP60709 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
ACTBP60709 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.44□□□□□ -0.1
ACTBP60709 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ACTBP60709 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ACTBP60709 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ACTBP60709 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
ACTBP60709 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
ACTBP60709 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
ACTBP60709 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.43□□□□□ -0.1
ACTBP60709 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ACTBP60709 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
ACTBP60709 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ACTBP60709 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ACTBP60709 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.43□□□□□ -0.1
ACTBP60709 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.43□□□□□ -0.1
ACTBP60709 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ACTBP60709 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.43□□□□□ -0.1
ACTBP60709 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms