Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.66■□□□□ 0.1
CDH12P55289 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH12P55289 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH12P55289 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.66■□□□□ 0.1
CDH12P55289 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH12P55289 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH12P55289 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH12P55289 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH12P55289 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH12P55289 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CDH12P55289 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.66■□□□□ 0.1
CDH12P55289 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDH12P55289 AC097637.2-201ENST00000624096 1997 ntBASIC15.66■□□□□ 0.1
CDH12P55289 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH12P55289 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH12P55289 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
CDH12P55289 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.65■□□□□ 0.1
CDH12P55289 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH12P55289 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH12P55289 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH12P55289 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH12P55289 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.65■□□□□ 0.1
CDH12P55289 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH12P55289 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.65■□□□□ 0.1
CDH12P55289 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH12P55289 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDH12P55289 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH12P55289 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.65■□□□□ 0.1
CDH12P55289 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.65■□□□□ 0.1
CDH12P55289 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.65■□□□□ 0.1
CDH12P55289 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC15.65■□□□□ 0.1
CDH12P55289 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.65■□□□□ 0.1
CDH12P55289 AL591684.3-201ENST00000605187 298 ntBASIC15.65■□□□□ 0.1
CDH12P55289 SIGLEC16-201ENST00000599858 1437 ntBASIC15.65■□□□□ 0.1
CDH12P55289 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDH12P55289 ME2P1-201ENST00000426028 1970 ntBASIC15.65■□□□□ 0.1
CDH12P55289 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.65■□□□□ 0.1
CDH12P55289 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH12P55289 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.65■□□□□ 0.1
CDH12P55289 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH12P55289 AC004817.3-201ENST00000602957 2129 ntBASIC15.65■□□□□ 0.1
CDH12P55289 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.65■□□□□ 0.1
CDH12P55289 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDH12P55289 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH12P55289 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDH12P55289 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CDH12P55289 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDH12P55289 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDH12P55289 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH12P55289 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
CDH12P55289 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
CDH12P55289 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDH12P55289 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH12P55289 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH12P55289 AL021920.2-201ENST00000624828 1351 ntBASIC15.64■□□□□ 0.09
CDH12P55289 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH12P55289 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDH12P55289 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDH12P55289 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
CDH12P55289 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH12P55289 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH12P55289 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH12P55289 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH12P55289 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
CDH12P55289 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.64■□□□□ 0.09
CDH12P55289 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH12P55289 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.64■□□□□ 0.09
CDH12P55289 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDH12P55289 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CDH12P55289 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDH12P55289 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CDH12P55289 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CDH12P55289 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC15.64■□□□□ 0.09
CDH12P55289 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.64■□□□□ 0.09
CDH12P55289 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.64■□□□□ 0.09
CDH12P55289 DUX4L17-201ENST00000557360 1267 ntBASIC15.64■□□□□ 0.09
CDH12P55289 TPM1-226ENST00000560959 925 ntTSL 2 BASIC15.64■□□□□ 0.09
CDH12P55289 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.64■□□□□ 0.09
CDH12P55289 AC138894.3-201ENST00000603787 634 ntBASIC15.64■□□□□ 0.09
CDH12P55289 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDH12P55289 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH12P55289 AC073592.4-201ENST00000623827 446 ntBASIC15.64■□□□□ 0.09
CDH12P55289 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CDH12P55289 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH12P55289 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CDH12P55289 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH12P55289 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CDH12P55289 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CDH12P55289 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH12P55289 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDH12P55289 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDH12P55289 LINC00895-201ENST00000629028 1637 ntBASIC15.64■□□□□ 0.09
CDH12P55289 AC079776.2-201ENST00000641154 1609 ntBASIC15.64■□□□□ 0.09
CDH12P55289 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
CDH12P55289 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH12P55289 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH12P55289 AC011270.2-201ENST00000624293 2550 ntBASIC15.64■□□□□ 0.09
CDH12P55289 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH12P55289 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CDH12P55289 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms