Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.83■□□□□ 0.44
CDH8P55286 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CDH8P55286 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH8P55286 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
CDH8P55286 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH8P55286 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH8P55286 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CDH8P55286 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.83■□□□□ 0.44
CDH8P55286 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH8P55286 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.83■□□□□ 0.44
CDH8P55286 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CDH8P55286 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH8P55286 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH8P55286 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH8P55286 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.83■□□□□ 0.44
CDH8P55286 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
CDH8P55286 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CDH8P55286 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.83■□□□□ 0.44
CDH8P55286 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CDH8P55286 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH8P55286 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CDH8P55286 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH8P55286 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.82■□□□□ 0.44
CDH8P55286 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH8P55286 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.82■□□□□ 0.44
CDH8P55286 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
CDH8P55286 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH8P55286 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH8P55286 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDH8P55286 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH8P55286 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.82■□□□□ 0.44
CDH8P55286 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.82■□□□□ 0.44
CDH8P55286 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDH8P55286 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH8P55286 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH8P55286 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH8P55286 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.82■□□□□ 0.44
CDH8P55286 AC002056.1-201ENST00000395613 760 ntBASIC17.82■□□□□ 0.44
CDH8P55286 PMS2P4-201ENST00000412466 1052 ntBASIC17.82■□□□□ 0.44
CDH8P55286 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.82■□□□□ 0.44
CDH8P55286 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDH8P55286 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.82■□□□□ 0.44
CDH8P55286 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.82■□□□□ 0.44
CDH8P55286 AC112191.1-201ENST00000523689 701 ntBASIC17.82■□□□□ 0.44
CDH8P55286 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDH8P55286 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.82■□□□□ 0.44
CDH8P55286 MIR4469-201ENST00000583919 79 ntBASIC17.82■□□□□ 0.44
CDH8P55286 AC139530.3-201ENST00000620344 690 ntBASIC17.82■□□□□ 0.44
CDH8P55286 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.82■□□□□ 0.44
CDH8P55286 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
CDH8P55286 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.82■□□□□ 0.44
CDH8P55286 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH8P55286 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CDH8P55286 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH8P55286 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDH8P55286 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.82■□□□□ 0.44
CDH8P55286 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.82■□□□□ 0.44
CDH8P55286 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH8P55286 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDH8P55286 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH8P55286 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDH8P55286 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
CDH8P55286 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH8P55286 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH8P55286 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.82■□□□□ 0.44
CDH8P55286 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH8P55286 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.81■□□□□ 0.44
CDH8P55286 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.81■□□□□ 0.44
CDH8P55286 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH8P55286 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.81■□□□□ 0.44
CDH8P55286 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.81■□□□□ 0.44
CDH8P55286 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH8P55286 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CDH8P55286 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH8P55286 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.81■□□□□ 0.44
CDH8P55286 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.81■□□□□ 0.44
CDH8P55286 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH8P55286 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH8P55286 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH8P55286 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CDH8P55286 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CDH8P55286 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.81■□□□□ 0.44
CDH8P55286 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.81■□□□□ 0.44
CDH8P55286 MKNK2P1-201ENST00000437526 628 ntBASIC17.81■□□□□ 0.44
CDH8P55286 CEND1P1-201ENST00000451006 455 ntBASIC17.81■□□□□ 0.44
CDH8P55286 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.81■□□□□ 0.44
CDH8P55286 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.81■□□□□ 0.44
CDH8P55286 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.81■□□□□ 0.44
CDH8P55286 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CDH8P55286 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.81■□□□□ 0.44
CDH8P55286 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.81■□□□□ 0.44
CDH8P55286 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.81■□□□□ 0.44
CDH8P55286 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.81■□□□□ 0.44
CDH8P55286 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.81■□□□□ 0.44
CDH8P55286 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
CDH8P55286 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH8P55286 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH8P55286 AL031731.1-201ENST00000642131 2094 ntBASIC17.81■□□□□ 0.44
CDH8P55286 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CDH8P55286 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms