Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.93□□□□□ -0.02
CSNK1A1P48729 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CSNK1A1P48729 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CSNK1A1P48729 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CSNK1A1P48729 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.92□□□□□ -0.02
CSNK1A1P48729 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CSNK1A1P48729 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CSNK1A1P48729 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC14.92□□□□□ -0.02
CSNK1A1P48729 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.92□□□□□ -0.02
CSNK1A1P48729 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.92□□□□□ -0.02
CSNK1A1P48729 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
CSNK1A1P48729 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.92□□□□□ -0.02
CSNK1A1P48729 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CSNK1A1P48729 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.92□□□□□ -0.02
CSNK1A1P48729 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.92□□□□□ -0.02
CSNK1A1P48729 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CSNK1A1P48729 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CSNK1A1P48729 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CSNK1A1P48729 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.92□□□□□ -0.02
CSNK1A1P48729 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CSNK1A1P48729 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
CSNK1A1P48729 PMS2P1-201ENST00000431037 1228 ntBASIC14.92□□□□□ -0.02
CSNK1A1P48729 AC009947.1-201ENST00000444350 727 ntBASIC14.92□□□□□ -0.02
CSNK1A1P48729 HLA-J-202ENST00000469281 1241 ntBASIC14.92□□□□□ -0.02
CSNK1A1P48729 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC14.92□□□□□ -0.02
CSNK1A1P48729 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CSNK1A1P48729 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.92□□□□□ -0.02
CSNK1A1P48729 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.92□□□□□ -0.02
CSNK1A1P48729 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.92□□□□□ -0.02
CSNK1A1P48729 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CSNK1A1P48729 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.92□□□□□ -0.02
CSNK1A1P48729 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CSNK1A1P48729 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.92□□□□□ -0.02
CSNK1A1P48729 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CSNK1A1P48729 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
CSNK1A1P48729 HLA-A-202ENST00000376806 1854 ntBASIC14.92□□□□□ -0.02
CSNK1A1P48729 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
CSNK1A1P48729 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.92□□□□□ -0.02
CSNK1A1P48729 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CSNK1A1P48729 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CSNK1A1P48729 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CSNK1A1P48729 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CSNK1A1P48729 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CSNK1A1P48729 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CSNK1A1P48729 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CSNK1A1P48729 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CSNK1A1P48729 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
CSNK1A1P48729 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CSNK1A1P48729 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
CSNK1A1P48729 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CSNK1A1P48729 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.91□□□□□ -0.02
CSNK1A1P48729 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CSNK1A1P48729 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CSNK1A1P48729 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CSNK1A1P48729 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CSNK1A1P48729 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CSNK1A1P48729 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CSNK1A1P48729 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CSNK1A1P48729 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CSNK1A1P48729 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CSNK1A1P48729 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CSNK1A1P48729 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CSNK1A1P48729 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CSNK1A1P48729 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
CSNK1A1P48729 CRYGEP-201ENST00000412192 528 ntBASIC14.91□□□□□ -0.02
CSNK1A1P48729 HCG4-201ENST00000418983 998 ntBASIC14.91□□□□□ -0.02
CSNK1A1P48729 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.91□□□□□ -0.02
CSNK1A1P48729 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CSNK1A1P48729 IGHV3-22-201ENST00000520721 359 ntBASIC14.91□□□□□ -0.02
CSNK1A1P48729 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.91□□□□□ -0.02
CSNK1A1P48729 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.91□□□□□ -0.02
CSNK1A1P48729 AC087641.1-201ENST00000557561 1021 ntBASIC14.91□□□□□ -0.02
CSNK1A1P48729 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CSNK1A1P48729 OR7E47P-204ENST00000575924 449 ntBASIC14.91□□□□□ -0.02
CSNK1A1P48729 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CSNK1A1P48729 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CSNK1A1P48729 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.91□□□□□ -0.02
CSNK1A1P48729 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.91□□□□□ -0.02
CSNK1A1P48729 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.91□□□□□ -0.02
CSNK1A1P48729 AL139011.1-202ENST00000642063 584 ntBASIC14.91□□□□□ -0.02
CSNK1A1P48729 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CSNK1A1P48729 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
CSNK1A1P48729 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CSNK1A1P48729 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CSNK1A1P48729 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CSNK1A1P48729 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CSNK1A1P48729 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CSNK1A1P48729 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CSNK1A1P48729 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CSNK1A1P48729 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CSNK1A1P48729 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CSNK1A1P48729 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CSNK1A1P48729 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CSNK1A1P48729 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.91□□□□□ -0.02
CSNK1A1P48729 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CSNK1A1P48729 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CSNK1A1P48729 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CSNK1A1P48729 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CSNK1A1P48729 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC14.91□□□□□ -0.02
CSNK1A1P48729 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms